Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MTND4P23-201ENST00000447723 1363 ntBASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CTHRC1Q96CG8 MFSD8-236ENST00000641509 4050 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC073073.2-201ENST00000609827 2578 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC010733.2-201ENST00000589496 5702 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 RNU6-593P-201ENST00000364716 112 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 MIR325-201ENST00000385260 98 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 PTMAP5-201ENST00000393073 333 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 MTCYBP4-201ENST00000401524 249 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 RNU6-293P-201ENST00000411259 106 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 UBE2V1P4-201ENST00000425374 344 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 MTCO2P12-201ENST00000427426 682 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 HMGB1P9-201ENST00000429856 646 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AL512844.2-201ENST00000433990 593 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 SNORD105B-201ENST00000458770 79 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC130509.1-201ENST00000464158 433 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC096745.1-201ENST00000509945 370 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.718-201ENST00000517110 102 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1231P-201ENST00000517185 103 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC025755.1-201ENST00000521306 278 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AL645944.1-201ENST00000603857 493 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 MIR92B-201ENST00000607575 96 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 RMST_4.1-201ENST00000616886 107 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 MIR6075-201ENST00000620782 95 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AP003355.3-201ENST00000623465 114 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AL359757.2-201ENST00000624309 274 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 MTND4LP32-201ENST00000636111 270 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 AL133383.2-201ENST00000622958 2336 ntBASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CTHRC1Q96CG8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.34□□□□□ -1.88
CTHRC1Q96CG8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CTHRC1Q96CG8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 AC118273.1-201ENST00000525324 3006 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 SNORA71.3-201ENST00000362582 128 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 SNORA63-201ENST00000363450 132 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RNU6-1227P-201ENST00000383981 107 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RNU6-601P-201ENST00000384540 107 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RNU2-3P-201ENST00000410144 191 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RNU4-14P-201ENST00000410858 122 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RNU6-370P-201ENST00000411008 104 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 CYCSP33-201ENST00000414485 327 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 SNRPEP9-201ENST00000436794 238 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 NDUFB1P2-201ENST00000449477 176 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 HMGN2P16-201ENST00000456802 261 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RN7SL594P-201ENST00000470590 287 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RN7SKP18-201ENST00000516005 275 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 RNU1-54P-201ENST00000517181 120 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 AL110115.1-201ENST00000614396 364 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 MIR6128-201ENST00000615528 109 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 AL034408.1-202ENST00000636088 415 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 U6.98-201ENST00000637157 84 ntBASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.33□□□□□ -1.88
CTHRC1Q96CG8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.32□□□□□ -1.88
CTHRC1Q96CG8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms