Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SNORA5B-201ENST00000363786 132 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 SNORA44-201ENST00000384584 132 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 MIR514A1-201ENST00000385133 98 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 YPEL5P1-201ENST00000419731 367 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AL451054.2-201ENST00000420896 202 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 RPL7L1P10-201ENST00000427790 463 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 NEFMP1-201ENST00000443423 1006 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 RPS20P20-201ENST00000460498 340 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 RPS23P3-201ENST00000470993 430 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC096576.1-201ENST00000489014 359 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC105417.1-201ENST00000514691 285 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 SNORA31.3-201ENST00000516029 96 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF4Q92544 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF4Q92544 AL355836.1-201ENST00000555951 870 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 AC008521.1-201ENST00000587471 187 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 BNIP3P9-201ENST00000603714 553 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 DISC2.1-201ENST00000612827 205 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 uc_338.25-201ENST00000613756 156 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AL008636.1-201ENST00000625038 1018 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AL137790.1-201ENST00000634283 177 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 MTND5P19-201ENST00000424872 1794 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TM9SF4Q92544 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
TM9SF4Q92544 OR4G1P-203ENST00000641984 1631 ntBASIC2.9□□□□□ -1.94
TM9SF4Q92544 Y_RNA.70-201ENST00000362886 110 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 SNORA80A-201ENST00000363922 136 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 RNU6-1148P-201ENST00000410992 104 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 CALM1P1-201ENST00000442082 433 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 MTND1P18-201ENST00000448191 573 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 RNU7-180P-201ENST00000459240 63 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 CCDC34P1-201ENST00000507441 517 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC117522.3-201ENST00000507974 584 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC025465.4-201ENST00000513422 638 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 RNU6-123P-201ENST00000516163 102 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC009812.2-201ENST00000517657 457 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC107016.2-201ENST00000547968 190 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 MIR2682-201ENST00000580305 110 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF4Q92544 MIR4298-201ENST00000584380 73 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 MIR4424-201ENST00000585257 86 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 NRBF2P5-201ENST00000603087 788 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AL591516.1-201ENST00000611326 274 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC012409.4-201ENST00000612923 249 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC130324.3-201ENST00000614165 542 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 AC091903.1-201ENST00000624322 454 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 MIR4275-201ENST00000636486 87 ntBASIC2.9□□□□□ -1.95
TM9SF4Q92544 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF4Q92544 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.9□□□□□ -1.95
TM9SF4Q92544 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF4Q92544 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF4Q92544 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF4Q92544 MAPK10-322ENST00000641485 4530 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 RNU6-288P-201ENST00000363690 104 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 SNORA51.4-201ENST00000364993 124 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF4Q92544 MIR514A2-201ENST00000385131 88 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 MIR514A3-201ENST00000385132 88 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 RNU6-550P-201ENST00000391057 101 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 RNU6-193P-201ENST00000410977 107 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 RPL21P111-201ENST00000418453 477 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 MTND5P20-201ENST00000448677 143 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 FABP5P13-201ENST00000452144 328 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 MTND3P16-201ENST00000452205 344 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF4Q92544 RPL38P4-201ENST00000502376 214 ntBASIC2.89□□□□□ -1.95
TM9SF4Q92544 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms