Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGB4Q8WW32 AC091152.2-201ENST00000591628 2569 ntBASIC3.34□□□□□ -1.88
HMGB4Q8WW32 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.88-201ENST00000363029 99 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 RNU6-778P-201ENST00000363269 103 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 RNU6-884P-201ENST00000363889 107 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 SNORA40C-201ENST00000391285 128 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AL356776.1-201ENST00000406574 447 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 BX682237.1-201ENST00000415016 335 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 SKA2P1-201ENST00000425592 390 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AL121601.2-201ENST00000438019 707 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 HMGB3P8-201ENST00000449709 577 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 RNU6-1208P-201ENST00000459588 107 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC109925.1-201ENST00000478069 331 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 FCF1P3-201ENST00000496394 590 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.654-201ENST00000497848 106 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC074344.1-201ENST00000512823 224 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 SNORA31.1-201ENST00000515993 133 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 SNORA31.5-201ENST00000516190 133 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC134698.4-201ENST00000523451 826 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC005476.1-201ENST00000554427 397 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 H3F3AP1-201ENST00000559984 334 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC092807.2-201ENST00000609367 243 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 U7.8-201ENST00000619968 63 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 AC022418.1-201ENST00000624118 445 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 U6.98-201ENST00000637157 84 ntBASIC3.33□□□□□ -1.88
HMGB4Q8WW32 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
HMGB4Q8WW32 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.167-201ENST00000363735 109 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 RNU6-283P-201ENST00000364788 107 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 RNU6-1179P-201ENST00000384667 107 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 MT-TL1-201ENST00000386347 75 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AL138885.1-201ENST00000405921 675 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 RPL5P18-201ENST00000406671 891 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.615-201ENST00000410769 117 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AL353621.1-201ENST00000418219 243 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 HSPE1P1-201ENST00000421494 318 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 MTND4LP11-201ENST00000422184 280 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC002075.2-201ENST00000425207 252 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC098614.2-201ENST00000426040 255 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 HMGN2P20-201ENST00000437531 273 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 MTATP6P23-201ENST00000440153 476 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 PRPS1P1-201ENST00000445305 876 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 RNU7-167P-201ENST00000459160 62 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 snoU13.28-201ENST00000459235 104 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 RN7SL863P-201ENST00000462370 296 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 DYNLL1P5-201ENST00000467158 270 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 MTND3P25-201ENST00000509243 135 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 Y_RNA.665-201ENST00000516177 98 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 SNORA70.19-201ENST00000516717 90 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 SNORA31.19-201ENST00000517079 126 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC022080.3-201ENST00000544433 482 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC090115.3-201ENST00000553218 849 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AP003122.6-201ENST00000623831 495 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC093536.2-201ENST00000565257 1406 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGB4Q8WW32 AC007256.1-201ENST00000392253 2765 ntBASIC3.32□□□□□ -1.88
HMGB4Q8WW32 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 AC010680.1-201ENST00000590024 3590 ntBASIC3.31□□□□□ -1.88
HMGB4Q8WW32 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGB4Q8WW32 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms