Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 Y_RNA.504-201ENST00000384481 104 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 SNORA12.2-201ENST00000391040 156 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 MIR921-201ENST00000401133 56 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 PIGFP3-201ENST00000441918 722 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 AC079354.2-201ENST00000453523 154 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-1012P-201ENST00000516606 109 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 AP000859.1-201ENST00000525536 307 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 OR4H12P-201ENST00000556269 907 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 FAM27D1-201ENST00000612308 341 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 AL450472.3-201ENST00000615578 367 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 AC092435.4-201ENST00000623012 4159 ntBASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHKBP1Q8TBC3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC007685.1-201ENST00000329806 452 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RNA5SP283-201ENST00000365604 119 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-1168P-201ENST00000390831 104 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-821P-201ENST00000390995 107 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-651P-201ENST00000411040 105 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AL096701.2-201ENST00000416920 238 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 PPP1R11P2-201ENST00000423543 382 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AL117339.2-201ENST00000430475 180 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 COX6B1P7-201ENST00000430845 235 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC087650.1-201ENST00000431445 468 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC090774.1-201ENST00000435925 246 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 U8.22-201ENST00000459141 133 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RN7SKP210-201ENST00000459176 261 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 U8.21-201ENST00000459536 136 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AL132838.2-201ENST00000492041 314 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AL592156.1-201ENST00000508758 304 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 MIR2355-201ENST00000517199 87 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC100770.1-201ENST00000532310 322 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AL355812.1-201ENST00000603215 216 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC108706.1-201ENST00000611053 297 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 AC112484.5-201ENST00000624189 228 ntBASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.49□□□□□ -1.69
SHKBP1Q8TBC3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-326P-201ENST00000365480 107 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-1035P-201ENST00000384477 107 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-1179P-201ENST00000384667 107 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RNU6-628P-201ENST00000410675 107 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RNU4-78P-201ENST00000410940 126 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AL391219.1-201ENST00000422570 483 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC073587.1-201ENST00000447093 876 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RNU7-87P-201ENST00000459343 62 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 SUMO2P6-201ENST00000505273 288 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC099522.1-202ENST00000514718 367 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC074133.1-201ENST00000515696 183 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC027288.2-201ENST00000553028 243 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC034105.4-201ENST00000568304 277 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC104581.2-201ENST00000572227 430 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 MIR4282-201ENST00000583613 67 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC004852.3-201ENST00000614131 326 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC074140.1-201ENST00000621617 208 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC007546.2-201ENST00000623996 360 ntBASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHKBP1Q8TBC3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.47□□□□□ -1.69
SHKBP1Q8TBC3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms