Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 AC007656.2-201ENST00000624902 4547 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 AL356274.2-201ENST00000624379 3752 ntBASIC4.5□□□□□ -1.69
LINC00116Q8NCU8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 MIR517A-201ENST00000385001 87 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 RN7SKP53-201ENST00000411337 315 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 MRPS18CP6-201ENST00000423587 223 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 HMGB1P27-201ENST00000431429 603 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 CKS1BP5-201ENST00000434172 273 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 FTH1P25-201ENST00000447665 469 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AC010655.3-201ENST00000478818 450 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 RPL21P13-201ENST00000488305 481 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 RNU4-77P-201ENST00000516692 156 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AC069113.1-201ENST00000517763 267 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AC104576.1-201ENST00000524225 88 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 RNU6-85P-201ENST00000605989 107 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AL606534.2-204ENST00000635008 178 ntBASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00116Q8NCU8 AL079305.1-201ENST00000623159 3008 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC058791.1-201ENST00000608412 3198 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 RNU6-379P-201ENST00000363813 104 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 RHOT1P2-201ENST00000366423 333 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.512-201ENST00000384518 102 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 HLFP1-201ENST00000402375 499 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AL353752.1-201ENST00000454946 260 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 snoU13.3-201ENST00000459441 104 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 RPL9P32-201ENST00000464118 620 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC008571.1-201ENST00000467232 300 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 S100A11P2-201ENST00000467589 312 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC018437.1-201ENST00000492214 406 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC023141.12-201ENST00000512399 199 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 SNORD116-26-201ENST00000516006 96 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 RNU6-475P-201ENST00000516073 104 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC109446.1-201ENST00000566172 220 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 MIR5004-201ENST00000579078 107 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 SNORD58B-201ENST00000607313 66 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 AC005332.5-201ENST00000591222 2919 ntBASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LINC00116Q8NCU8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 Y_RNA.314-201ENST00000365114 102 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 RNU6-1329P-201ENST00000365664 107 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 HMGB1P9-201ENST00000429856 646 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 RPL29P29-201ENST00000448725 423 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 PCNPP5-201ENST00000452246 481 ntBASIC4.47□□□□□ -1.69
LINC00116Q8NCU8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms