Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 MIR3913-1-201ENST00000577744 102 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 MIR3682-201ENST00000581338 84 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 NRBF2P1-201ENST00000587407 859 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AL356280.1-201ENST00000603614 379 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC121334.2-201ENST00000605387 271 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AL139286.2-201ENST00000606838 396 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC098614.4-201ENST00000607601 462 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC069234.5-201ENST00000611056 416 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AL359198.2-201ENST00000611836 194 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AC091834.1-201ENST00000614543 472 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 uc_338.12-201ENST00000616344 181 ntBASIC2.72□□□□□ -1.97
RTL3Q8N8U3 AL161431.1-201ENST00000618966 4205 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC062016.1-201ENST00000355719 319 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 Y_RNA.41-201ENST00000362646 102 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RNY3P13-201ENST00000365542 102 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 Y_RNA.517-201ENST00000384551 106 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RNU6-192P-201ENST00000391253 100 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RPL23AP32-201ENST00000395315 459 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 C1DP2-201ENST00000418167 426 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC063976.3-201ENST00000426849 329 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RPL39P40-201ENST00000445481 146 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RPL23AP20-201ENST00000447965 421 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 MTATP6P7-201ENST00000453315 681 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RNU6-953P-201ENST00000459154 107 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AP001486.1-201ENST00000463339 476 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 MTCO2P29-201ENST00000465212 189 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RBM43P1-201ENST00000476891 1081 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RN7SL432P-201ENST00000484057 298 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RN7SKP298-201ENST00000515950 94 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RNU6-430P-201ENST00000517078 107 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 MTCYBP20-201ENST00000524239 1129 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 RPS3AP4-201ENST00000555161 764 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 MIR4319-201ENST00000577285 85 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC005332.10-201ENST00000612725 619 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC099842.1-201ENST00000619919 596 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC136475.10-201ENST00000620253 385 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC010329.5-201ENST00000623497 2174 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 AC092447.7-201ENST00000422212 1621 ntBASIC2.71□□□□□ -1.98
RTL3Q8N8U3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
RTL3Q8N8U3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 SNORA5B-201ENST00000363786 132 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 RNU2-52P-201ENST00000410680 190 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AL031779.1-201ENST00000415663 330 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC073614.1-201ENST00000438690 650 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AL049873.1-201ENST00000480540 376 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AP003072.2-201ENST00000527756 676 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AC068790.6-201ENST00000602558 258 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AL021997.1-201ENST00000605757 193 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.7□□□□□ -1.98
RTL3Q8N8U3 AL137003.2-201ENST00000606924 2538 ntBASIC2.7□□□□□ -1.98
RTL3Q8N8U3 MTND5P26-201ENST00000426018 1752 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 Y_RNA.3-201ENST00000362331 103 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RNU5E-1-201ENST00000362477 120 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RNU1-100P-201ENST00000365255 165 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RNU6-259P-201ENST00000383999 107 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RNU6-1042P-201ENST00000384204 107 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 MIR34A-201ENST00000385130 110 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RNU6-817P-201ENST00000391083 104 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 Y_RNA.599-201ENST00000410489 109 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RNA5SP184-201ENST00000411071 108 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RPLP0P7-201ENST00000416050 667 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC011816.1-201ENST00000441346 546 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 USP9YP15-201ENST00000442391 422 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms