Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.04□□□□□ -1.76
ARHGEF39Q8N4T4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 MIR383-201ENST00000362257 73 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 Y_RNA.123-201ENST00000363338 102 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RNU6-527P-201ENST00000363425 104 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RNA5SP28-201ENST00000363841 119 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RNU6-217P-201ENST00000384164 104 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RNU6-907P-201ENST00000390924 102 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RPS29P13-201ENST00000402041 169 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 PCNPP5-201ENST00000452246 481 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 NUTF2P7-201ENST00000453086 375 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 MTATP6P7-201ENST00000453315 681 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RNA5SP246-201ENST00000458909 119 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 UBE2CP3-201ENST00000502715 450 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 RN7SKP289-201ENST00000517244 295 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC091144.1-201ENST00000519573 138 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC090281.1-201ENST00000523019 276 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC100770.1-201ENST00000532310 322 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC107016.1-201ENST00000550463 337 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 CYCSP39-201ENST00000565821 309 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 AC062037.2-201ENST00000610137 73 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 MIR8062-201ENST00000621515 85 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 MTND5P7-201ENST00000413558 1798 ntBASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ARHGEF39Q8N4T4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 RNU6-784P-201ENST00000384330 106 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 BTF3L4P2-201ENST00000392798 346 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 RPL21P1-201ENST00000399532 476 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 MTCYBP2-201ENST00000407745 171 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 HMGN2P30-201ENST00000423237 256 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 RPS29P27-201ENST00000463711 170 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 RN7SL283P-201ENST00000489055 303 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 RPL23AP49-201ENST00000492925 468 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 RNU6-911P-201ENST00000516523 104 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 SNORA40.15-201ENST00000516884 107 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 SNORA31.18-201ENST00000517043 134 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AP004607.1-201ENST00000524456 203 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 IPO5P1-202ENST00000600039 287 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AL390123.1-201ENST00000603216 237 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 ARF4P1-201ENST00000605447 541 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 AL138721.1-201ENST00000616756 179 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 MIR7151-201ENST00000617477 60 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 MIR492-201ENST00000638676 116 ntBASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
ARHGEF39Q8N4T4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 AC022336.2-201ENST00000568966 2538 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 RNU6-874P-201ENST00000362390 105 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 Y_RNA.592-201ENST00000410274 109 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 RNU6-847P-201ENST00000411115 108 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 TMEM167AP1-201ENST00000423409 219 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 RBMY1KP-201ENST00000423480 476 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 FTH1P6-201ENST00000430768 320 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 RPL37P4-201ENST00000448908 268 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 AC079354.2-201ENST00000453523 154 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 PARP4P3-201ENST00000510265 317 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 AC134698.5-201ENST00000519444 336 ntBASIC4.01□□□□□ -1.77
ARHGEF39Q8N4T4 MRPL49P2-201ENST00000521066 465 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms