Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 TBCAP3-201ENST00000512475 312 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 RPL23AP94-201ENST00000512518 302 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 SNORA31.3-201ENST00000516029 96 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC009902.1-201ENST00000519351 183 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AP003122.3-201ENST00000526316 255 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 COX6CP5-201ENST00000527162 228 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 MIR3941-201ENST00000582572 103 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 VN1R107P-201ENST00000601784 209 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC174048.1-201ENST00000603389 144 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 IGHV3-29-201ENST00000604817 344 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL670379.4-201ENST00000605279 254 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 MIR486-1-201ENST00000612171 68 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC087588.2-201ENST00000617667 426 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AC010378.1-201ENST00000619270 362 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 PLCE1P1-201ENST00000622094 305 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 AL353748.2-201ENST00000622148 471 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A3Q8N4M1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 MIR423-201ENST00000362201 94 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.404-201ENST00000383978 102 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-190P-201ENST00000384154 102 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-434P-201ENST00000384376 107 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.500-201ENST00000384466 111 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-331P-201ENST00000384724 107 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 U3.26-201ENST00000391236 204 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 CISD1P1-201ENST00000393907 327 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 MIR1183-201ENST00000408856 89 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-712P-201ENST00000410558 100 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RPS12P23-201ENST00000419579 400 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RPL23AP69-201ENST00000431134 458 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 RPL29P29-201ENST00000448725 423 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AC083806.3-201ENST00000614016 455 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AC022418.1-201ENST00000624118 445 ntBASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A3Q8N4M1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 SNORA75B-201ENST00000384053 137 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.496-201ENST00000384444 101 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-95P-201ENST00000384697 107 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 RNU6-907P-201ENST00000390924 102 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 SNORA75.6-201ENST00000391318 127 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 MRPL42P3-201ENST00000401492 326 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 RNU4-78P-201ENST00000410940 126 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 RPL21P109-201ENST00000422213 475 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC004866.2-201ENST00000438285 481 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 NEFMP1-201ENST00000443423 1006 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 FABP5P13-201ENST00000452144 328 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC104472.2-201ENST00000469035 601 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC093663.1-201ENST00000497190 394 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC023141.12-201ENST00000512399 199 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 PHBP14-201ENST00000512887 367 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 MTCO2P24-201ENST00000515611 426 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.670-201ENST00000516255 105 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 RN7SKP60-201ENST00000516985 239 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 SNORA31.22-201ENST00000517204 135 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AL137843.1-201ENST00000605078 385 ntBASIC3.67□□□□□ -1.82
SLC44A3Q8N4M1 AC018462.2-201ENST00000605375 395 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms