Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AC015813.6-201ENST00000624409 5808 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 DDX39BP1-205ENST00000422507 192 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 SNRPEP9-201ENST00000436794 238 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AC079168.2-201ENST00000453977 416 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AURKAPS2-201ENST00000454983 333 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AC009127.1-201ENST00000467090 155 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AC040958.1-201ENST00000561102 201 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AC007225.2-201ENST00000562529 256 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 AC009127.3-201ENST00000570531 403 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 IMMP1LP3-201ENST00000604197 224 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 MIR6715B-201ENST00000637172 77 ntBASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC116Q8IYX3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 MTND5P35-201ENST00000557537 1720 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 U3.2-201ENST00000362981 210 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 Z98749.2-208ENST00000381646 500 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 RNU6-578P-201ENST00000390980 103 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 MIR1286-201ENST00000408112 78 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 CTSL3P-202ENST00000412179 788 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AC112220.1-201ENST00000434628 355 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 COPS8P2-201ENST00000473228 627 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 RN7SKP164-201ENST00000516138 266 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 RNA5SP230-201ENST00000517039 122 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 RNU6-1183P-201ENST00000517054 60 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 CYCSP23-201ENST00000519781 313 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 TRAV28-201ENST00000557548 323 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 MIR4744-201ENST00000581563 82 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AC136601.2-201ENST00000604356 474 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AL034408.1-202ENST00000636088 415 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 AC004925.1-201ENST00000624256 2706 ntBASIC4.84□□□□□ -1.63
CCDC116Q8IYX3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 NEAT1-202ENST00000501122 22743 ntBASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
CCDC116Q8IYX3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AC092376.2-201ENST00000622621 4116 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 CUL1P1-201ENST00000509510 2425 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RNU6-199P-201ENST00000362954 107 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RNU5F-3P-201ENST00000363767 117 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 SNORA36A-201ENST00000384221 132 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 Y_RNA.498-201ENST00000384460 102 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RNU6-376P-201ENST00000384731 106 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 MIR518D-201ENST00000385014 87 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 MIR708-201ENST00000390708 88 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 OR2AH1P-201ENST00000425717 928 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RPL23AP58-201ENST00000440453 469 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 snoU13.6-201ENST00000458785 104 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RN7SL727P-201ENST00000482164 296 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 CYCTP-201ENST00000504253 315 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RNA5SP54-201ENST00000516951 92 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 RNA5SP170-201ENST00000517150 101 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AP004371.1-201ENST00000525240 214 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 HSPE1P4-201ENST00000550617 308 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 LINC00933-203ENST00000559812 219 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms