Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 U8.9-201ENST00000365667 134 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AL513475.1-201ENST00000406602 315 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 RNU2-25P-201ENST00000411041 191 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AC087499.2-201ENST00000432861 149 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 MTATP6P16-201ENST00000434543 526 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AL583843.1-201ENST00000456070 346 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AL121769.1-201ENST00000469473 401 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 RBBP4P6-201ENST00000508098 202 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 OR5AL2P-201ENST00000532185 920 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AP000873.5-201ENST00000533906 236 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AC138761.3-201ENST00000579993 334 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 MIR548AC-201ENST00000585049 88 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 AC087752.4-201ENST00000605911 462 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 MIR6134-201ENST00000617606 109 ntBASIC2.9□□□□□ -1.95
PRPF39Q86UA1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PRPF39Q86UA1 RNU6-61P-201ENST00000365528 109 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 Z98749.2-208ENST00000381646 500 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 MIR512-1-201ENST00000384913 84 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AL390237.1-201ENST00000404226 1415 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 RNU6-387P-201ENST00000411331 105 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 MTND3P17-201ENST00000416968 344 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AL445687.1-201ENST00000439946 251 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 MTND5P30-201ENST00000452896 1731 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 RPL9P33-201ENST00000484311 566 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 EIF4EP3-201ENST00000498782 656 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC116655.1-201ENST00000508324 901 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 OR5BN1P-201ENST00000532955 829 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 MIR4765-201ENST00000585007 77 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AL645944.1-201ENST00000603857 493 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC006566.1-201ENST00000608943 513 ntBASIC2.89□□□□□ -1.95
PRPF39Q86UA1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PRPF39Q86UA1 AC010329.5-201ENST00000623497 2174 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RNU6-166P-201ENST00000384371 107 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RNU6-456P-201ENST00000384493 107 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AL139039.1-201ENST00000401900 692 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RNA5SP184-201ENST00000411071 108 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 CALM2P2-201ENST00000428512 440 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC133104.1-201ENST00000429100 218 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 USP9YP29-201ENST00000445112 563 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RPL31P3-201ENST00000458430 332 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RPS27AP9-201ENST00000477681 438 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC103975.1-201ENST00000482506 483 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 FAM92A1P2-202ENST00000504766 877 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 SNORA31.6-201ENST00000516241 130 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 HSPE1P20-201ENST00000538133 289 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC012213.3-201ENST00000577199 777 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 MIR3913-1-201ENST00000577744 102 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 MTCO3P13-201ENST00000577757 781 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 MIR3199-1-201ENST00000582434 88 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 MIR3616-201ENST00000584070 92 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC008521.1-201ENST00000587471 187 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC068790.2-201ENST00000602601 557 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC024153.1-201ENST00000603103 365 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AL022154.1-201ENST00000604698 785 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AL627309.6-201ENST00000606857 840 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC005046.1-201ENST00000608515 625 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC109347.2-201ENST00000610220 349 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC010338.1-201ENST00000621823 717 ntBASIC2.88□□□□□ -1.95
PRPF39Q86UA1 AC092593.1-201ENST00000515413 1815 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms