Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNA5SP399-201ENST00000364003 117 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 U1.1-201ENST00000384101 164 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.489-201ENST00000384410 101 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.512-201ENST00000384518 102 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.577-201ENST00000384794 101 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 MIR124-3-201ENST00000384866 87 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 MIR93-201ENST00000385024 80 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AL353621.1-201ENST00000418219 243 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 RANP8-201ENST00000444720 713 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 OSTCP8-201ENST00000445117 448 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 PCNPP5-201ENST00000452246 481 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 RN7SL293P-201ENST00000481765 281 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AC108860.1-201ENST00000484521 383 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 MLLT10P2-201ENST00000506434 249 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-1315P-201ENST00000517187 99 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AC016727.2-201ENST00000603988 621 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AC062037.2-201ENST00000610137 73 ntBASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.9□□□□□ -1.63
PRPF40BQ6NWY9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 SNORD74.4-201ENST00000364129 80 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-512P-201ENST00000364438 103 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 RNA5SP97-201ENST00000365006 84 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.307-201ENST00000365022 117 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-325P-201ENST00000411132 105 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AL035423.1-201ENST00000420331 213 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 UBE2D3P2-201ENST00000424409 445 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC079780.1-201ENST00000428259 207 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC069285.2-201ENST00000440210 275 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AL133162.1-201ENST00000463228 453 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 RPL22P13-201ENST00000493291 347 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 SUMO2P6-201ENST00000505273 288 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC104619.4-201ENST00000510773 249 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 RNY3P15-201ENST00000516297 97 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 IGKV2-38-201ENST00000517443 247 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AP005902.1-201ENST00000521358 186 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 AL021879.1-201ENST00000611756 288 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 LINC00901.1-201ENST00000617252 152 ntBASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PRPF40BQ6NWY9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 MIR448-201ENST00000362131 111 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.48-201ENST00000362710 103 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-596P-201ENST00000365395 98 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 RNVU1-14-201ENST00000384770 164 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AL356968.1-201ENST00000416622 474 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AL591419.1-201ENST00000427423 339 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 USP9YP7-201ENST00000436723 430 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 USP9YP32-201ENST00000452432 430 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AC022447.4-201ENST00000504053 364 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.668-201ENST00000516233 93 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 MIR892C-201ENST00000516410 77 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 RNU7-4P-201ENST00000516961 62 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 RNA5SP471-201ENST00000516971 106 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AL157871.3-201ENST00000557231 293 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AC022968.1-201ENST00000567372 442 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 FAM60BP-201ENST00000578364 658 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 MIR7975-201ENST00000619350 68 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 MIR4272-201ENST00000635924 64 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 MAPK10-253ENST00000641010 4072 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 AC004925.1-201ENST00000624256 2706 ntBASIC4.88□□□□□ -1.63
PRPF40BQ6NWY9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 AC008669.1-201ENST00000565823 2178 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 OR4G2P-202ENST00000641004 1759 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 Y_RNA.106-201ENST00000363189 100 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-379P-201ENST00000363813 104 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 RNU6-395P-201ENST00000365662 106 ntBASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF40BQ6NWY9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms