Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC144NLQ6NUI1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.11-201ENST00000362375 109 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.384-201ENST00000383909 102 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 RNU6-95P-201ENST00000384697 107 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 RN7SKP158-201ENST00000410453 326 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 RPL37P10-201ENST00000412884 288 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 SNORD56-201ENST00000413522 71 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 ATP5HP2-201ENST00000433885 485 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 OR4C10P-201ENST00000434991 931 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 RPS3AP52-201ENST00000435639 297 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 SETP5-201ENST00000437270 562 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 NUTF2P7-201ENST00000453086 375 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.635-201ENST00000459041 101 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 FTH1P2-201ENST00000466086 412 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 RPL23AP45-201ENST00000476406 468 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC096745.1-201ENST00000509945 370 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC104576.1-201ENST00000524225 88 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 CYCSP30-201ENST00000546447 172 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AL451007.1-201ENST00000595491 289 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC024220.1-201ENST00000603675 484 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 AC064836.2-201ENST00000609491 462 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 MIR6134-201ENST00000617606 109 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 PLCE1P1-201ENST00000622094 305 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 SCARNA4-202ENST00000625402 129 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 ZNF962P-201ENST00000443465 3140 ntBASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CCDC144NLQ6NUI1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC110491.1-201ENST00000562191 2010 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 RNU4-79P-201ENST00000362764 141 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.58-201ENST00000362807 102 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.67-201ENST00000362870 100 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.154-201ENST00000363624 102 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 RNY3P1-201ENST00000365085 102 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 RNY3-201ENST00000365484 102 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.387-201ENST00000383918 102 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 Y_RNA.490-201ENST00000384413 102 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AL445529.1-201ENST00000398713 389 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 RPL7P2-201ENST00000427639 268 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 FABP5P14-201ENST00000437273 393 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 HIGD1AP2-201ENST00000446367 280 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AL031274.1-201ENST00000450334 232 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 RPL31P61-201ENST00000496160 376 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC113155.1-201ENST00000511141 769 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 MIR3160-1-201ENST00000577972 85 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC016727.1-205ENST00000605437 569 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AL161629.2-201ENST00000615347 275 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 AC068724.3-201ENST00000625906 87 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.16□□□□□ -1.9
CCDC144NLQ6NUI1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC144NLQ6NUI1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC144NLQ6NUI1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC144NLQ6NUI1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC144NLQ6NUI1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC144NLQ6NUI1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 RNU5E-7P-201ENST00000365290 117 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 Y_RNA.535-201ENST00000384612 99 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 MIR199A2-201ENST00000385289 110 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 RNU4-14P-201ENST00000410858 122 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 AC005300.1-201ENST00000428401 373 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 AL645568.3-201ENST00000433683 316 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 UBE2V1P7-201ENST00000446395 340 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 HMGN2P10-201ENST00000448085 265 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 AL031183.1-201ENST00000457667 207 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 RNU7-23P-201ENST00000459465 62 ntBASIC3.15□□□□□ -1.91
CCDC144NLQ6NUI1 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms