Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HIST2H2BCQ6DN03 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
HIST2H2BCQ6DN03 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HIST2H2BCQ6DN03 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HIST2H2BCQ6DN03 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 RNU6-82P-201ENST00000363970 107 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 Y_RNA.399-201ENST00000383955 105 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 RNU6-140P-201ENST00000384566 108 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AL592114.1-201ENST00000403842 483 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 HSPE1P8-201ENST00000406997 288 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 RNU2-68P-201ENST00000410878 191 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 RPL26P27-201ENST00000414397 437 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AL365400.1-201ENST00000431854 640 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AL121890.1-201ENST00000435457 205 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 HMGB1P18-201ENST00000438801 619 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MRPL50P4-201ENST00000446432 475 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 NDUFB1P2-201ENST00000449477 176 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MTATP6P7-201ENST00000453315 681 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 CACYBPP2-201ENST00000453625 678 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 RPS29P15-201ENST00000458329 171 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AC006512.1-201ENST00000468816 291 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AC233702.1-201ENST00000482905 502 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 SNORA70.14-201ENST00000516205 110 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 Y_RNA.676-201ENST00000516393 96 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AC105029.1-201ENST00000520250 669 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 IGLV3-26-201ENST00000520756 302 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AP005597.4-201ENST00000526762 229 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AL157871.3-201ENST00000557231 293 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MIR4424-201ENST00000585257 86 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 VN1R80P-201ENST00000597126 338 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MIR7851-201ENST00000610611 160 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 RMST_3.1-201ENST00000611651 109 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 MIR7702-201ENST00000621931 59 ntBASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
HIST2H2BCQ6DN03 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RNU1-15P-201ENST00000353977 144 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 Y_RNA.144-201ENST00000363521 113 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RNU6-288P-201ENST00000363690 104 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 Y_RNA.431-201ENST00000384086 102 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 SNORA54-201ENST00000384281 123 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RNU6-738P-201ENST00000384531 106 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC068050.1-201ENST00000394891 380 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 OR9R1P-201ENST00000412200 877 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 NDUFS5P4-201ENST00000412983 318 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RPL30P2-201ENST00000414021 291 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AL353678.1-201ENST00000422735 741 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RPL35AP12-201ENST00000425362 338 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC092573.2-201ENST00000434546 243 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 HLA-N-201ENST00000437516 135 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC107083.1-201ENST00000439643 279 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RNU7-180P-201ENST00000459240 63 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC092436.1-201ENST00000506450 503 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC006445.2-201ENST00000510061 472 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 MIR5692A1-201ENST00000580523 69 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC018638.8-201ENST00000588755 281 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC008962.1-201ENST00000605729 304 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RMST_9.1-201ENST00000619945 193 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 AC100810.6-201ENST00000638068 285 ntBASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
HIST2H2BCQ6DN03 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.06□□□□□ -1.92
HIST2H2BCQ6DN03 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HIST2H2BCQ6DN03 Y_RNA.33-201ENST00000362591 102 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms