Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 HMGB1P22-201ENST00000505315 124 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC009901.1-201ENST00000506703 541 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 SNORA14.1-201ENST00000516113 141 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC007458.1-201ENST00000542812 373 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC093249.1-201ENST00000567049 203 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 MIR5692C1-201ENST00000585309 91 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 Z99571.1-201ENST00000636677 394 ntBASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC178Q5BJE1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 DEFB108F-201ENST00000344638 222 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 MIR369-201ENST00000362155 70 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.339-201ENST00000365325 102 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC091390.3-201ENST00000426478 338 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC097713.2-201ENST00000430199 356 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AL158071.1-201ENST00000430315 461 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 SETP5-201ENST00000437270 562 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 HMGB3P30-201ENST00000457863 606 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 RPL21P41-201ENST00000459863 264 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC087884.1-201ENST00000469738 328 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 RPL7P5-201ENST00000471472 736 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 RPL32P34-201ENST00000486380 400 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 RNU6-1170P-201ENST00000515974 106 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 RNU2-58P-201ENST00000516403 183 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 RNU6-1256P-201ENST00000516539 103 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.718-201ENST00000517110 102 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC012182.1-201ENST00000570133 895 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC007151.1-201ENST00000572774 483 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC080078.3-201ENST00000605407 463 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC012314.7-201ENST00000619693 93 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 AC022418.1-201ENST00000624118 445 ntBASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC178Q5BJE1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC178Q5BJE1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC178Q5BJE1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.315-201ENST00000365117 102 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.399-201ENST00000383955 105 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 RNU6-43P-201ENST00000384302 107 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 SNORD116-29-201ENST00000384516 83 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 RNY4P36-201ENST00000391116 96 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AL139397.2-201ENST00000404529 772 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC093578.1-201ENST00000415219 368 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC063979.1-201ENST00000415539 377 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC002075.2-201ENST00000425207 252 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC007919.1-201ENST00000429380 217 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC008264.1-201ENST00000447612 367 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 MRPS31P2-201ENST00000451581 518 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 RPS24P6-201ENST00000452670 400 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 PRSS3P4-201ENST00000453323 162 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 RPL21P10-201ENST00000463521 490 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC027575.1-201ENST00000481064 460 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 RPS15AP34-201ENST00000487776 387 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC078817.1-201ENST00000492623 435 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 MTND5P5-201ENST00000503764 376 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC008526.1-201ENST00000509149 338 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC104136.1-201ENST00000512969 394 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 RNU6-927P-201ENST00000516199 100 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 RNU6-143P-201ENST00000516942 93 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 BNIP3P22-201ENST00000593399 556 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 AP002826.1-201ENST00000608835 315 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.812-201ENST00000610788 101 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.784-201ENST00000613803 101 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 AC034102.8-201ENST00000615146 484 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.787-201ENST00000616522 101 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.780-201ENST00000617336 101 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 Y_RNA.801-201ENST00000619005 101 ntBASIC4□□□□□ -1.77
CCDC178Q5BJE1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4□□□□□ -1.77
CCDC178Q5BJE1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CCDC178Q5BJE1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms