Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 ATP1B3P1-201ENST00000605365 821 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 U2.17-201ENST00000611454 95 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 U6.99-201ENST00000637524 83 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 AC100810.6-201ENST00000638068 285 ntBASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RUNDC3AQ59EK9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 SNORA14A-201ENST00000364773 135 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 SNORA62.3-201ENST00000365110 153 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 MT-TL1-201ENST00000386347 75 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 RNU6-876P-201ENST00000391295 104 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 RNU4-26P-201ENST00000410270 107 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 ARL5AP1-201ENST00000418991 388 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC007389.2-201ENST00000434630 306 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC009969.1-201ENST00000438726 172 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC087884.1-201ENST00000469738 328 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC083904.1-201ENST00000487828 231 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 MTCO2P30-201ENST00000503662 364 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC134698.4-201ENST00000523451 826 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC118273.2-201ENST00000532092 465 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AL163153.1-201ENST00000554223 283 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC006130.2-201ENST00000586202 326 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC006557.5-201ENST00000603126 811 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 BNIP3P10-201ENST00000605360 577 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AL121772.2-201ENST00000614331 297 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 U6.42-201ENST00000618440 107 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AC103705.1-201ENST00000619013 241 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 AL031601.2-202ENST00000622650 282 ntBASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RUNDC3AQ59EK9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 MTND5P7-201ENST00000413558 1798 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 Y_RNA.88-201ENST00000363029 99 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 RNA5SP197-201ENST00000363357 119 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AL162578.1-201ENST00000406202 378 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 RPLP0P7-201ENST00000416050 667 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 CYCSP4-201ENST00000429682 331 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 MTATP6P23-201ENST00000440153 476 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 SNORA84-201ENST00000459229 133 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 HMGB1P30-201ENST00000492455 606 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 TBCAP3-201ENST00000512475 312 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 MIR892C-201ENST00000516410 77 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 SNORA25.17-201ENST00000517184 124 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AC018638.8-201ENST00000588755 281 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 CTHRC1P1-201ENST00000605383 469 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AC002044.1-201ENST00000606707 158 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 MIR7851-201ENST00000610611 160 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AL136221.1-201ENST00000621449 509 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 CR392039.5-201ENST00000623201 510 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AP003122.6-201ENST00000623831 495 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AC093536.2-201ENST00000565257 1406 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 AC121333.1-201ENST00000567488 2709 ntBASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
RUNDC3AQ59EK9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RUNDC3AQ59EK9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RUNDC3AQ59EK9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC233263.6-201ENST00000631132 1963 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms