Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 SNORD27.1-201ENST00000516319 72 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 RNU6-1282P-201ENST00000516735 96 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC068657.1-201ENST00000520807 306 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AP003072.2-201ENST00000527756 676 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 TPRKBP2-201ENST00000565969 475 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC073657.2-201ENST00000605661 303 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC093788.1-201ENST00000609356 927 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AC024940.5-201ENST00000622889 474 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 ELF2P3-201ENST00000445099 1506 ntBASIC2.73□□□□□ -1.97
PDLIM3Q53GG5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC026241.1-201ENST00000517873 2142 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AL137003.2-201ENST00000606924 2538 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 MIR422A-201ENST00000362286 90 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 RNU4-35P-201ENST00000362588 141 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 RNU6-996P-201ENST00000365438 107 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 RNU6-1035P-201ENST00000384477 107 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 FO393413.1-201ENST00000402892 195 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 RPL32P35-201ENST00000415214 394 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC063979.1-201ENST00000415539 377 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC092047.1-201ENST00000424997 240 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 CALM2P2-201ENST00000428512 440 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 ATP5JP1-201ENST00000431631 322 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC000111.3-201ENST00000433478 193 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 RPS24P13-201ENST00000442520 397 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AL513124.1-201ENST00000450410 614 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AL118520.1-201ENST00000450770 291 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC019235.1-201ENST00000503847 207 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 RNA5SP401-201ENST00000515920 127 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC025165.5-201ENST00000602802 578 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC107304.1-201ENST00000604229 296 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC007621.1-201ENST00000604544 437 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AL035413.2-201ENST00000604801 525 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC093732.2-201ENST00000607950 274 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 FTX_3.1-201ENST00000610451 147 ntBASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.72□□□□□ -1.97
PDLIM3Q53GG5 AC103710.2-202ENST00000641454 2853 ntBASIC2.71□□□□□ -1.97
PDLIM3Q53GG5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 NACAP2-201ENST00000318548 624 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 SNORA69-201ENST00000383895 132 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 RNU6-217P-201ENST00000384164 104 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 RNU6-606P-201ENST00000384721 111 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 RNU6-550P-201ENST00000391057 101 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 RNU6-193P-201ENST00000410977 107 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC080125.1-201ENST00000414888 684 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 DBIP2-201ENST00000419076 262 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AL160275.3-201ENST00000423876 471 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AL590639.1-201ENST00000456484 337 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AL121769.1-201ENST00000469473 401 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC126182.1-201ENST00000478134 357 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC109927.2-201ENST00000506416 303 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 RNA5SP385-201ENST00000515947 110 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 RNU6-1281P-201ENST00000516223 105 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 Y_RNA.693-201ENST00000516641 110 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 SCARNA20.6-201ENST00000517251 106 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC104383.1-201ENST00000530297 370 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 AC136619.2-201ENST00000563361 631 ntBASIC2.71□□□□□ -1.98
PDLIM3Q53GG5 HMGB1P33-201ENST00000563485 527 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms