Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
USP41Q3LFD5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 OR5BN1P-201ENST00000532955 829 ntBASIC3.13□□□□□ -1.91
USP41Q3LFD5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 AC004805.2-201ENST00000605382 482 ntBASIC3.13□□□□□ -1.91
USP41Q3LFD5 MIR15A-201ENST00000607334 83 ntBASIC3.13□□□□□ -1.91
USP41Q3LFD5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.13□□□□□ -1.91
USP41Q3LFD5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
USP41Q3LFD5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP41Q3LFD5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP41Q3LFD5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP41Q3LFD5 AC103710.2-202ENST00000641454 2853 ntBASIC3.13□□□□□ -1.91
USP41Q3LFD5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP41Q3LFD5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP41Q3LFD5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP41Q3LFD5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP41Q3LFD5 Y_RNA.9-201ENST00000362354 101 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 RNU6-996P-201ENST00000365438 107 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 RNU6-116P-201ENST00000384042 109 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 SNORD115-47-201ENST00000391226 86 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 CALM2P2-201ENST00000428512 440 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 RPL21P40-201ENST00000428586 483 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 FABP5P15-201ENST00000453566 214 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 RPS15AP34-201ENST00000487776 387 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC092436.1-201ENST00000506450 503 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC105417.1-201ENST00000514691 285 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 RNU6-718P-201ENST00000516166 105 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 RNA5SP76-201ENST00000516277 87 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 RNA5SP165-201ENST00000517142 115 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 MTND1P5-201ENST00000517906 940 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC007536.1-201ENST00000533382 349 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC138761.3-201ENST00000579993 334 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 MIR3162-201ENST00000581818 82 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AL133393.1-201ENST00000603277 287 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC093788.1-201ENST00000609356 927 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC092794.1-201ENST00000612734 582 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC090517.2-201ENST00000614966 680 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 ELF2P3-201ENST00000445099 1506 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 CKAP2P1-201ENST00000555477 2049 ntBASIC3.12□□□□□ -1.91
USP41Q3LFD5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP41Q3LFD5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP41Q3LFD5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP41Q3LFD5 MAPK10-322ENST00000641485 4530 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RNU6-1090P-201ENST00000364065 94 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RNU6-270P-201ENST00000364131 105 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 SNORA4.3-201ENST00000365564 137 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RNU6-483P-201ENST00000384088 108 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 SNORA18.3-201ENST00000384122 132 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RNU6-1035P-201ENST00000384477 107 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 Y_RNA.534-201ENST00000384599 112 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AL139039.1-201ENST00000401900 692 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RN7SKP58-201ENST00000411010 305 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 BMS1P22-201ENST00000414726 313 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 OR6C66P-201ENST00000414917 930 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 EIF1P1-201ENST00000421436 341 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 AL596276.1-201ENST00000434465 418 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 SNRPEP9-201ENST00000436794 238 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC016691.1-201ENST00000441321 413 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 DPPA3P1-201ENST00000448050 469 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AL118520.1-201ENST00000450770 291 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 CACYBPP2-201ENST00000453625 678 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC083798.1-201ENST00000472671 131 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 SUMO2P6-201ENST00000505273 288 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC109927.2-201ENST00000506416 303 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RN7SKP132-201ENST00000516001 208 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RNU6-1281P-201ENST00000516223 105 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 SNORA40.12-201ENST00000516329 111 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 RNU6-685P-201ENST00000517088 95 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.11□□□□□ -1.91
USP41Q3LFD5 OR5AQ1P-201ENST00000527596 927 ntBASIC3.11□□□□□ -1.91
USP41Q3LFD5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms