Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.88□□□□□ -1.79
SF3B3Q15393 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.88□□□□□ -1.79
SF3B3Q15393 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.88□□□□□ -1.79
SF3B3Q15393 MTND4P7-201ENST00000523876 130 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 AP001804.3-201ENST00000525146 880 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.88□□□□□ -1.79
SF3B3Q15393 MIR5583-1-201ENST00000580941 59 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 MIR4513-201ENST00000581077 86 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.88□□□□□ -1.79
SF3B3Q15393 BNIP3P25-201ENST00000596023 559 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 CTHRC1P1-201ENST00000605383 469 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.88□□□□□ -1.79
SF3B3Q15393 AC092807.2-201ENST00000609367 243 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 AL390240.1-201ENST00000612950 384 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 TUG1_2.1-201ENST00000614234 87 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 SNHG22-203ENST00000617833 660 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 MIR6130-201ENST00000619419 109 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 AC092628.2-201ENST00000622492 339 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 AL137790.1-201ENST00000634283 177 ntBASIC3.88□□□□□ -1.79
SF3B3Q15393 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SF3B3Q15393 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SF3B3Q15393 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SF3B3Q15393 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.87□□□□□ -1.79
SF3B3Q15393 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SF3B3Q15393 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SF3B3Q15393 MIR30E-201ENST00000362104 92 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 SNORA71.1-201ENST00000364523 117 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 Y_RNA.378-201ENST00000365652 113 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 Y_RNA.414-201ENST00000384011 101 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 USP9YP20-201ENST00000419224 558 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.87□□□□□ -1.79
SF3B3Q15393 AC093106.2-201ENST00000428212 385 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.87□□□□□ -1.79
SF3B3Q15393 NDUFA5P4-201ENST00000436704 385 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AL162389.1-201ENST00000449233 177 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 MTND4P17-201ENST00000470444 350 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 UBE2DNL-203ENST00000474922 222 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 MTCO1P29-201ENST00000496868 288 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.87□□□□□ -1.79
SF3B3Q15393 AC098591.2-201ENST00000510152 315 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 RNU6-864P-201ENST00000516256 108 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 RNU6-1038P-201ENST00000516516 104 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AC009812.2-201ENST00000517657 457 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.87□□□□□ -1.79
SF3B3Q15393 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SF3B3Q15393 AL137161.1-201ENST00000532231 390 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.87□□□□□ -1.79
SF3B3Q15393 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.87□□□□□ -1.79
SF3B3Q15393 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.87□□□□□ -1.79
SF3B3Q15393 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.87□□□□□ -1.79
SF3B3Q15393 POLR3GP2-201ENST00000588366 668 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AC012669.1-201ENST00000603209 283 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 AL365204.3-201ENST00000612448 685 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.87□□□□□ -1.79
SF3B3Q15393 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SF3B3Q15393 MTND4P14-201ENST00000435799 1354 ntBASIC3.87□□□□□ -1.79
SF3B3Q15393 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SF3B3Q15393 AL136164.4-201ENST00000625013 2135 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 API5P2-201ENST00000397055 1498 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.86□□□□□ -1.79
SF3B3Q15393 MIR135A2-201ENST00000384854 100 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AL592114.1-201ENST00000403842 483 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 RNU6-387P-201ENST00000411331 105 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.86□□□□□ -1.79
SF3B3Q15393 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.86□□□□□ -1.79
SF3B3Q15393 AL353729.1-201ENST00000425044 720 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 RPL7P46-201ENST00000425129 740 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.86□□□□□ -1.79
SF3B3Q15393 HMGB3P11-201ENST00000440127 604 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.86□□□□□ -1.79
SF3B3Q15393 AC025750.2-201ENST00000442609 450 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 MTCO3P45-201ENST00000443036 613 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AC020550.1-201ENST00000447385 163 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 SSXP4-201ENST00000451349 245 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AC234775.1-201ENST00000454247 670 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.86□□□□□ -1.79
SF3B3Q15393 AC008481.1-201ENST00000463278 396 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 RN7SL432P-201ENST00000484057 298 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AC083904.1-201ENST00000487828 231 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 Y_RNA.654-201ENST00000497848 106 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 KLHL2P1-201ENST00000508691 521 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.86□□□□□ -1.79
SF3B3Q15393 RNU6-1095P-201ENST00000516148 108 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AL121821.2-201ENST00000556081 394 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.86□□□□□ -1.79
SF3B3Q15393 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.86□□□□□ -1.79
SF3B3Q15393 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.86□□□□□ -1.79
SF3B3Q15393 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SF3B3Q15393 MIR7106-201ENST00000612419 65 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SF3B3Q15393 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SF3B3Q15393 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SF3B3Q15393 AC121333.1-201ENST00000567488 2709 ntBASIC3.86□□□□□ -1.79
SF3B3Q15393 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.85□□□□□ -1.79
SF3B3Q15393 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SF3B3Q15393 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SF3B3Q15393 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SF3B3Q15393 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms