Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC007349.4-201ENST00000608114 532 ntBASIC0.96□□□□□ -2.26
CPSF1Q10570 AL589743.7-201ENST00000612637 233 ntBASIC0.96□□□□□ -2.26
CPSF1Q10570 AC022202.1-201ENST00000613515 211 ntBASIC0.96□□□□□ -2.26
CPSF1Q10570 AP003485.1-201ENST00000625093 753 ntBASIC0.96□□□□□ -2.26
CPSF1Q10570 AC017104.5-201ENST00000637647 639 ntBASIC0.96□□□□□ -2.26
CPSF1Q10570 HAUS6P2-201ENST00000433254 2404 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 AP000776.1-201ENST00000530032 1663 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CPSF1Q10570 OR4G2P-201ENST00000328113 903 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 AC092685.1-201ENST00000447960 1243 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.95□□□□□ -2.26
CPSF1Q10570 AP1S2P1-201ENST00000457344 379 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 AC015724.1-201ENST00000478577 156 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 MIR4711-201ENST00000578274 70 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 AL138963.2-201ENST00000605137 226 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 AC021851.1-201ENST00000608537 1082 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 AL136313.1-201ENST00000624804 202 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CPSF1Q10570 MTND5P30-201ENST00000452896 1731 ntBASIC0.95□□□□□ -2.26
CPSF1Q10570 RNA5SP457-201ENST00000363657 124 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 RNU6-748P-201ENST00000384648 107 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 MIR518A2-201ENST00000384966 87 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 RNA5SP193-201ENST00000410353 107 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 RNU6-516P-201ENST00000411381 104 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 CR848007.2-201ENST00000424918 787 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 RPS20P20-201ENST00000460498 340 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 AC092757.1-201ENST00000467293 467 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.94□□□□□ -2.26
CPSF1Q10570 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.94□□□□□ -2.26
CPSF1Q10570 AC021146.8-201ENST00000507455 733 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 LSM6P2-201ENST00000552208 177 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 AC007151.1-201ENST00000572774 483 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.94□□□□□ -2.26
CPSF1Q10570 AC005786.1-201ENST00000588553 154 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 MTND4LP5-201ENST00000605152 292 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 AL121652.1-201ENST00000608851 448 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 DUSP12P1-201ENST00000612874 516 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 AL356585.4-201ENST00000623078 1229 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.94□□□□□ -2.26
CPSF1Q10570 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.94□□□□□ -2.26
CPSF1Q10570 AC005832.2-201ENST00000538921 1430 ntBASIC0.94□□□□□ -2.26
CPSF1Q10570 RNU6-338P-201ENST00000383888 105 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 RNU6-217P-201ENST00000384164 104 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 HMGB1P17-201ENST00000403495 628 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.93□□□□□ -2.26
CPSF1Q10570 RPL7P34-201ENST00000433316 712 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.93□□□□□ -2.26
CPSF1Q10570 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.93□□□□□ -2.26
CPSF1Q10570 AC117454.1-201ENST00000491120 168 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.93□□□□□ -2.26
CPSF1Q10570 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.93□□□□□ -2.26
CPSF1Q10570 AP003973.1-201ENST00000604639 691 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 AL161729.4-201ENST00000604650 476 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 AC018638.7-201ENST00000605836 1114 ntBASIC0.93□□□□□ -2.26
CPSF1Q10570 SNORD114-23-201ENST00000363536 72 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
CPSF1Q10570 SNORD51-201ENST00000384320 80 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 RNU6-921P-201ENST00000384361 107 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 RNU2-63P-201ENST00000410792 194 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 RPL37P10-201ENST00000412884 288 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.92□□□□□ -2.26
CPSF1Q10570 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.92□□□□□ -2.26
CPSF1Q10570 PTENP1-201ENST00000447117 1215 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.92□□□□□ -2.26
CPSF1Q10570 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.92□□□□□ -2.26
CPSF1Q10570 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.92□□□□□ -2.26
CPSF1Q10570 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.92□□□□□ -2.26
CPSF1Q10570 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
CPSF1Q10570 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.92□□□□□ -2.26
CPSF1Q10570 AC011374.2-201ENST00000607135 526 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 AL355802.3-201ENST00000607571 545 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 AC090517.3-201ENST00000625170 141 ntBASIC0.92□□□□□ -2.26
CPSF1Q10570 RNA5SP499-201ENST00000363982 119 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 RNU6-1235P-201ENST00000384559 107 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 MIR30A-201ENST00000385092 71 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 RPP40P1-201ENST00000426762 456 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 MED14P1-201ENST00000430517 648 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 TOMM22P2-201ENST00000430735 237 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CPSF1Q10570 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF1Q10570 RPL26P6-201ENST00000440913 438 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 JTBP1-201ENST00000441314 247 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.91□□□□□ -2.26
CPSF1Q10570 RNU6-498P-201ENST00000459468 107 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.91□□□□□ -2.26
CPSF1Q10570 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF1Q10570 RNU6-491P-201ENST00000516099 110 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC008127.2-201ENST00000549925 1075 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.91□□□□□ -2.26
CPSF1Q10570 AL022067.1-201ENST00000602426 454 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.91□□□□□ -2.26
CPSF1Q10570 MIR6130-201ENST00000619419 109 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC024581.2-201ENST00000619986 252 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC009318.4-201ENST00000620496 486 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 AC024595.1-201ENST00000623088 387 ntBASIC0.91□□□□□ -2.26
CPSF1Q10570 Z99571.1-201ENST00000636677 394 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms