Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC244205.2-202ENST00000635781 342 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 AL732372.2-225ENST00000642124 456 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.24□□□□□ -1.73
SSRP1Q08945 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSRP1Q08945 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.24□□□□□ -1.73
SSRP1Q08945 CEP170P1-201ENST00000502249 4587 ntBASIC4.24□□□□□ -1.73
SSRP1Q08945 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSRP1Q08945 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.23□□□□□ -1.73
SSRP1Q08945 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSRP1Q08945 MIR3074-201ENST00000384885 81 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 MIR10A-201ENST00000385043 110 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 SNORD73A-201ENST00000386062 65 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSRP1Q08945 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
SSRP1Q08945 MTCYBP6-201ENST00000441810 138 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 Y_RNA.653-201ENST00000459091 95 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.23□□□□□ -1.73
SSRP1Q08945 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.23□□□□□ -1.73
SSRP1Q08945 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.23□□□□□ -1.73
SSRP1Q08945 HMGN1P11-201ENST00000508668 303 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 AC005741.1-201ENST00000511094 432 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 AC104576.1-201ENST00000524225 88 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.23□□□□□ -1.73
SSRP1Q08945 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.23□□□□□ -1.73
SSRP1Q08945 AC025946.2-201ENST00000603398 234 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 AC080078.3-201ENST00000605407 463 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 AC123912.5-201ENST00000605470 343 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.23□□□□□ -1.73
SSRP1Q08945 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.23□□□□□ -1.73
SSRP1Q08945 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSRP1Q08945 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.23□□□□□ -1.73
SSRP1Q08945 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.23□□□□□ -1.73
SSRP1Q08945 FAM35BP-202ENST00000497389 3337 ntBASIC4.23□□□□□ -1.73
SSRP1Q08945 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.22□□□□□ -1.73
SSRP1Q08945 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
SSRP1Q08945 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSRP1Q08945 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSRP1Q08945 ZNF807-201ENST00000328088 1707 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 AL359837.1-201ENST00000381357 287 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 RAC1P3-201ENST00000416129 580 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 AL096701.2-201ENST00000416920 238 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.22□□□□□ -1.73
SSRP1Q08945 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.22□□□□□ -1.73
SSRP1Q08945 RPL12P25-201ENST00000455592 494 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 AC092798.1-201ENST00000458542 409 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 SNORA84-201ENST00000459229 133 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 AC027575.1-201ENST00000481064 460 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
SSRP1Q08945 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.22□□□□□ -1.73
SSRP1Q08945 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.22□□□□□ -1.73
SSRP1Q08945 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.22□□□□□ -1.73
SSRP1Q08945 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.22□□□□□ -1.73
SSRP1Q08945 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.22□□□□□ -1.73
SSRP1Q08945 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSRP1Q08945 MIR92B-201ENST00000607575 96 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 AC133104.2-201ENST00000615272 193 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSRP1Q08945 CUL1P1-201ENST00000509510 2425 ntBASIC4.22□□□□□ -1.73
SSRP1Q08945 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SSRP1Q08945 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SSRP1Q08945 AC008725.1-201ENST00000605123 2263 ntBASIC4.21□□□□□ -1.73
SSRP1Q08945 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SSRP1Q08945 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SSRP1Q08945 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SSRP1Q08945 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 SNORD42.2-201ENST00000365570 69 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 MIR34A-201ENST00000385130 110 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 RNU6-328P-201ENST00000390887 106 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AL445529.1-201ENST00000398713 389 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AL591034.1-201ENST00000407447 340 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 CYCSP19-201ENST00000411715 316 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 PGBD4P6-201ENST00000421501 610 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 AL158071.1-201ENST00000430315 461 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.21□□□□□ -1.74
SSRP1Q08945 HIGD1AP11-201ENST00000438361 280 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.21□□□□□ -1.74
SSRP1Q08945 NOTCH2P1-201ENST00000443481 624 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AL118496.2-201ENST00000448300 230 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 Y_RNA.639-201ENST00000458981 102 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AC020593.1-201ENST00000507399 299 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.21□□□□□ -1.74
SSRP1Q08945 AL355598.1-201ENST00000604169 202 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AP000787.2-201ENST00000604432 568 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AC006077.1-201ENST00000604746 343 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 AL161423.1-201ENST00000613700 262 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 Z69720.2-201ENST00000624755 279 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.21□□□□□ -1.74
SSRP1Q08945 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 AC007656.2-201ENST00000624902 4547 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 KPNA2P1-201ENST00000458289 1591 ntBASIC4.21□□□□□ -1.74
SSRP1Q08945 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms