Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL138478.1-201ENST00000612252 832 ntBASIC0.38□□□□□ -2.35
PRKDCP78527 AP003400.5-201ENST00000624827 617 ntBASIC0.38□□□□□ -2.35
PRKDCP78527 AC010329.5-201ENST00000623497 2174 ntBASIC0.38□□□□□ -2.35
PRKDCP78527 SNORA68.1-201ENST00000364537 132 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.37□□□□□ -2.35
PRKDCP78527 TPTE2P6-202ENST00000445572 1007 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AC087879.1-201ENST00000474343 374 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 RPL31P60-201ENST00000478450 367 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AC103851.1-201ENST00000506833 274 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
PRKDCP78527 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.37□□□□□ -2.35
PRKDCP78527 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.37□□□□□ -2.35
PRKDCP78527 BNIP3P25-201ENST00000596023 559 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AC015849.6-201ENST00000605454 474 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 PRR13P7-201ENST00000605538 430 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AC055876.5-201ENST00000605667 259 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.37□□□□□ -2.35
PRKDCP78527 AC147055.4-201ENST00000504399 745 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AC025857.1-201ENST00000525252 377 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.37□□□□□ -2.35
PRKDCP78527 AL513185.3-201ENST00000433335 1300 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 U6atac.2-201ENST00000408644 118 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.37□□□□□ -2.35
PRKDCP78527 AC104164.3-201ENST00000467363 1258 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.37□□□□□ -2.35
PRKDCP78527 AC118282.2-201ENST00000508739 374 ntBASIC0.37□□□□□ -2.35
PRKDCP78527 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.37□□□□□ -2.35
PRKDCP78527 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
PRKDCP78527 RNU6-185P-201ENST00000384421 107 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AC060773.1-201ENST00000421698 310 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.36□□□□□ -2.35
PRKDCP78527 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.36□□□□□ -2.35
PRKDCP78527 AL356585.4-201ENST00000623078 1229 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.36□□□□□ -2.35
PRKDCP78527 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
PRKDCP78527 MIR561-201ENST00000385216 97 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 MTCO1P56-201ENST00000401674 224 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 UBE2V2P3-201ENST00000433562 437 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AC245102.2-201ENST00000448956 180 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 MTND1P16-201ENST00000465177 898 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AC069294.1-201ENST00000608397 350 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AL121890.5-201ENST00000620848 304 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 RNU4-42P-201ENST00000364738 142 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 SNORD26-201ENST00000384147 75 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 SNORA40.19-201ENST00000390846 128 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 EDDM3CP-201ENST00000415977 425 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AC096649.2-201ENST00000416186 393 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 UBE2D3P2-201ENST00000424409 445 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AC024082.2-201ENST00000434771 238 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 FGF7P5-201ENST00000441829 291 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 HSPE1P13-201ENST00000451143 297 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.36□□□□□ -2.35
PRKDCP78527 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.36□□□□□ -2.35
PRKDCP78527 SNORA31.13-201ENST00000516624 135 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 IGLVI-20-201ENST00000519296 130 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 AC006001.4-201ENST00000622243 395 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
PRKDCP78527 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
PRKDCP78527 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.36□□□□□ -2.35
PRKDCP78527 RPL39P29-201ENST00000447779 157 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 RPS20P24-201ENST00000457473 361 ntBASIC0.36□□□□□ -2.35
PRKDCP78527 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.36□□□□□ -2.35
PRKDCP78527 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
PRKDCP78527 MTND4P11-201ENST00000417020 1058 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.35□□□□□ -2.35
PRKDCP78527 RSL24D1P8-201ENST00000434442 492 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AL354941.1-201ENST00000438600 464 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.35□□□□□ -2.35
PRKDCP78527 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 SNRPGP12-201ENST00000449481 213 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.35□□□□□ -2.35
PRKDCP78527 AP001025.1-201ENST00000486139 332 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.35□□□□□ -2.35
PRKDCP78527 AC004817.2-201ENST00000561794 651 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 RNU6-968P-201ENST00000384076 107 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 Y_RNA.571-201ENST00000384753 98 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 RPS24P7-201ENST00000416921 246 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AL365496.1-201ENST00000426885 215 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AC093106.2-201ENST00000428212 385 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.35□□□□□ -2.35
PRKDCP78527 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.35□□□□□ -2.35
PRKDCP78527 ADAM3B-201ENST00000569937 840 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AC008751.2-201ENST00000597885 980 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AP003399.1-201ENST00000637534 361 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 Y_RNA.67-201ENST00000362870 100 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 RNU6-1083P-201ENST00000384022 107 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 MRPL35P1-201ENST00000404272 572 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.35□□□□□ -2.35
PRKDCP78527 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
PRKDCP78527 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.35□□□□□ -2.35
PRKDCP78527 AC108729.1-201ENST00000487812 947 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 CIR1P1-201ENST00000524055 1133 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 LSM6P2-201ENST00000552208 177 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 MTCYBP27-201ENST00000555160 670 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 HMGB1P14-201ENST00000557424 591 ntBASIC0.35□□□□□ -2.35
PRKDCP78527 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.35□□□□□ -2.35
PRKDCP78527 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms