Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HAUS6P2-201ENST00000433254 2404 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-0.18□□□□□ -2.44
RPL39P62891 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 MIR19B1-201ENST00000384829 87 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 MIR493-201ENST00000385254 89 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 AL034374.1-201ENST00000406329 351 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 RPS15AP40-201ENST00000419621 391 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC-0.18□□□□□ -2.44
RPL39P62891 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC-0.18□□□□□ -2.44
RPL39P62891 AC010631.1-201ENST00000474150 156 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC-0.18□□□□□ -2.44
RPL39P62891 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.18□□□□□ -2.44
RPL39P62891 AC090142.3-201ENST00000519012 385 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 AC016957.1-201ENST00000534895 309 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.18□□□□□ -2.44
RPL39P62891 MIR4768-201ENST00000585270 74 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 FAM60CP-201ENST00000591086 664 ntBASIC-0.18□□□□□ -2.44
RPL39P62891 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.18□□□□□ -2.44
RPL39P62891 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.18□□□□□ -2.44
RPL39P62891 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
RPL39P62891 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC-0.19□□□□□ -2.44
RPL39P62891 AC027514.1-201ENST00000588561 1603 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 OR5T3-201ENST00000303059 1023 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
RPL39P62891 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 AL031663.1-201ENST00000437445 219 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 AC027119.1-201ENST00000440877 241 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 AC098869.1-201ENST00000481627 292 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 MTCYBP16-201ENST00000509187 1129 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.19□□□□□ -2.44
RPL39P62891 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 MTATP6P9-201ENST00000515039 680 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 OR5AK1P-201ENST00000524837 922 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 AC090525.3-201ENST00000605601 189 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 AL021997.1-201ENST00000605757 193 ntBASIC-0.19□□□□□ -2.44
RPL39P62891 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.19□□□□□ -2.44
RPL39P62891 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.19□□□□□ -2.44
RPL39P62891 RNU6-1164P-201ENST00000364428 107 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 RNU6-185P-201ENST00000384421 107 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 MIR32-201ENST00000384965 70 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.2□□□□□ -2.44
RPL39P62891 AC092989.1-201ENST00000481235 277 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 AC147055.4-201ENST00000504399 745 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 AC118282.2-201ENST00000508739 374 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.2□□□□□ -2.44
RPL39P62891 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.2□□□□□ -2.44
RPL39P62891 BX322635.1-201ENST00000605804 496 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 AC080013.4-201ENST00000607624 649 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
RPL39P62891 MIR6864-201ENST00000617935 70 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 AC027309.3-201ENST00000623419 351 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 AC015726.3-201ENST00000624501 418 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.2□□□□□ -2.44
RPL39P62891 AC106858.1-201ENST00000637497 429 ntBASIC-0.2□□□□□ -2.44
RPL39P62891 MIR302D-201ENST00000362275 68 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 SNORD114-24-201ENST00000365029 72 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 MIR499A-201ENST00000384903 122 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 RNU6-837P-201ENST00000391056 108 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 HNRNPDP2-201ENST00000406475 478 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC-0.21□□□□□ -2.44
RPL39P62891 MTND4P20-201ENST00000424125 869 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 AC234781.2-201ENST00000426370 994 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.21□□□□□ -2.44
RPL39P62891 AC091435.1-201ENST00000505442 584 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.21□□□□□ -2.44
RPL39P62891 RNA5SP220-201ENST00000516298 104 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 SCARNA3-201ENST00000517097 143 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 OR6C7P-201ENST00000547875 934 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 CYP3A52P-201ENST00000563326 91 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 Z83818.1-201ENST00000603584 150 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 AP003973.1-201ENST00000604639 691 ntBASIC-0.21□□□□□ -2.44
RPL39P62891 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
RPL39P62891 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
RPL39P62891 RNU4-23P-201ENST00000362839 140 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 RNU6-700P-201ENST00000391043 107 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 MIR1250-201ENST00000408098 113 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 RNU2-21P-201ENST00000410368 188 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 MTCO3P12-201ENST00000416718 547 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 MTND4P11-201ENST00000417020 1058 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC-0.22□□□□□ -2.44
RPL39P62891 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.22□□□□□ -2.44
RPL39P62891 MTCO1P44-201ENST00000441935 243 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC-0.22□□□□□ -2.44
RPL39P62891 AC022447.1-201ENST00000515358 464 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 SNORA62.5-201ENST00000516634 120 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 RNA5SP490-201ENST00000517141 136 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC-0.22□□□□□ -2.44
RPL39P62891 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC-0.22□□□□□ -2.44
RPL39P62891 MIR6734-201ENST00000621166 68 ntBASIC-0.22□□□□□ -2.44
RPL39P62891 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
RPL39P62891 RBBP8P1-201ENST00000449447 1844 ntBASIC-0.22□□□□□ -2.45
RPL39P62891 SNORD1A-201ENST00000364968 72 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms