Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.15□□□□□ -1.75
HERVK_113P62684 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HERVK_113P62684 AC116337.1-201ENST00000509680 687 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 AC087854.1-201ENST00000519706 414 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.15□□□□□ -1.75
HERVK_113P62684 SNRPGP16-201ENST00000533275 226 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.15□□□□□ -1.75
HERVK_113P62684 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.15□□□□□ -1.75
HERVK_113P62684 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.15□□□□□ -1.75
HERVK_113P62684 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERVK_113P62684 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
HERVK_113P62684 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERVK_113P62684 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERVK_113P62684 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HERVK_113P62684 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERVK_113P62684 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HERVK_113P62684 AL049641.1-201ENST00000441055 1948 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 AL133383.2-201ENST00000622958 2336 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HERVK_113P62684 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HERVK_113P62684 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HERVK_113P62684 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
HERVK_113P62684 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HERVK_113P62684 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 UBE2L2-201ENST00000254302 429 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 MIR423-201ENST00000362201 94 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 Y_RNA.145-201ENST00000363527 102 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 RNU6-266P-201ENST00000364225 107 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 RNU6-214P-201ENST00000384130 107 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 MIR634-201ENST00000385208 97 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 SNORA48.2-201ENST00000390926 124 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 Z98941.1-201ENST00000407764 100 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 SNORA11.2-201ENST00000408318 127 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 AL513331.1-201ENST00000411908 397 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.14□□□□□ -1.75
HERVK_113P62684 AC017083.1-201ENST00000428093 483 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 AL592045.1-201ENST00000429867 352 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 TXNP1-201ENST00000441872 371 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.14□□□□□ -1.75
HERVK_113P62684 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.14□□□□□ -1.75
HERVK_113P62684 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 RPS15AP34-201ENST00000487776 387 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 AC078817.1-201ENST00000492623 435 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 RN7SKP83-201ENST00000516512 178 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.14□□□□□ -1.75
HERVK_113P62684 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.14□□□□□ -1.75
HERVK_113P62684 DNAJC8P1-201ENST00000554535 372 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.14□□□□□ -1.75
HERVK_113P62684 AL512643.1-201ENST00000635735 524 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HERVK_113P62684 HSPA8P1-201ENST00000425843 1833 ntBASIC4.14□□□□□ -1.75
HERVK_113P62684 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.14□□□□□ -1.75
HERVK_113P62684 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.14□□□□□ -1.75
HERVK_113P62684 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERVK_113P62684 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HERVK_113P62684 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HERVK_113P62684 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERVK_113P62684 RNU6-371P-201ENST00000364283 108 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 SNORA75B-201ENST00000384053 137 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 RNU6-306P-201ENST00000384617 107 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 SNORD17-201ENST00000390930 237 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HERVK_113P62684 AC063979.1-201ENST00000415539 377 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.13□□□□□ -1.75
HERVK_113P62684 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AL359672.1-201ENST00000442302 409 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.13□□□□□ -1.75
HERVK_113P62684 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC092451.1-201ENST00000480211 153 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC026801.1-201ENST00000497178 464 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC096745.1-201ENST00000509945 370 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.13□□□□□ -1.75
HERVK_113P62684 Y_RNA.708-201ENST00000516950 96 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC022634.1-201ENST00000520765 532 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.13□□□□□ -1.75
HERVK_113P62684 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.13□□□□□ -1.75
HERVK_113P62684 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.13□□□□□ -1.75
HERVK_113P62684 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.13□□□□□ -1.75
HERVK_113P62684 MIR548AC-201ENST00000585049 88 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC073539.2-201ENST00000597113 165 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 SNRPGP15-201ENST00000600149 222 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.13□□□□□ -1.75
HERVK_113P62684 NUTF2P8-201ENST00000604593 363 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 YPEL5P2-201ENST00000605553 359 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HERVK_113P62684 AC009229.3-201ENST00000608056 282 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC034102.8-201ENST00000615146 484 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC008121.3-201ENST00000618726 433 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 AC092608.2-201ENST00000624427 218 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 Z99571.1-201ENST00000636677 394 ntBASIC4.13□□□□□ -1.75
HERVK_113P62684 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HERVK_113P62684 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.13□□□□□ -1.75
HERVK_113P62684 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HERVK_113P62684 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HERVK_113P62684 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms