Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR6840-201ENST00000611937 71 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 U4atac.1-201ENST00000618345 95 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC006386.1-201ENST00000619436 415 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC012150.2-201ENST00000621300 544 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 AC091953.2-201ENST00000623979 160 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 U6.99-201ENST00000637524 83 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
CLDN6P56747 SNORA51.11-201ENST00000384442 131 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC119751.3-201ENST00000399720 670 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 CIR1P3-201ENST00000405137 479 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 RNU4-62P-201ENST00000410125 130 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN6P56747 ZNF90P2-204ENST00000419323 1075 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN6P56747 AC016691.1-201ENST00000441321 413 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 IPO7P1-201ENST00000442031 636 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN6P56747 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN6P56747 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN6P56747 AL441985.1-201ENST00000457727 251 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN6P56747 AC008526.1-201ENST00000509149 338 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 MTCYBP43-201ENST00000513621 740 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN6P56747 SNORA31.3-201ENST00000516029 96 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN6P56747 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN6P56747 MIR4293-201ENST00000584305 78 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC068790.3-201ENST00000602988 553 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC091834.1-201ENST00000614543 472 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN6P56747 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.87□□□□□ -2.11
CLDN6P56747 AL031601.2-202ENST00000622650 282 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 AC004808.1-201ENST00000627671 721 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 Z75746.1-201ENST00000440243 2080 ntBASIC1.87□□□□□ -2.11
CLDN6P56747 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN6P56747 RNU6-278P-201ENST00000390945 109 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 AL627390.1-201ENST00000396055 340 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 RNU6-321P-201ENST00000410912 106 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN6P56747 GPM6BP3-201ENST00000442797 145 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 PSPHP1-201ENST00000450062 261 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN6P56747 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN6P56747 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 RPL36AP48-201ENST00000485521 314 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 AC055855.1-201ENST00000489563 579 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.86□□□□□ -2.11
CLDN6P56747 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 RNU6-1183P-201ENST00000517054 60 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.86□□□□□ -2.11
CLDN6P56747 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.86□□□□□ -2.11
CLDN6P56747 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN6P56747 AF129408.1-201ENST00000608767 431 ntBASIC1.86□□□□□ -2.11
CLDN6P56747 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN6P56747 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN6P56747 RNU6-1284P-201ENST00000363701 100 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 Y_RNA.269-201ENST00000364685 89 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 RNU6-748P-201ENST00000384648 107 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 RNU4-22P-201ENST00000411058 166 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN6P56747 RPS24P7-201ENST00000416921 246 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN6P56747 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN6P56747 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN6P56747 AL445669.1-201ENST00000426743 755 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN6P56747 TXNL1P1-201ENST00000429528 554 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AL021397.1-201ENST00000451806 248 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC090515.1-201ENST00000465295 476 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC005840.1-201ENST00000498412 377 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN6P56747 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.85□□□□□ -2.11
CLDN6P56747 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 SNORA31.25-201ENST00000517242 134 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 DEFB108A-201ENST00000530110 222 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AP000907.2-201ENST00000530827 353 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 CYCSP26-201ENST00000534107 320 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN6P56747 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC069431.2-201ENST00000604149 1099 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN6P56747 RNU6-88P-201ENST00000606801 100 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC009233.1-201ENST00000616477 371 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC084768.2-201ENST00000622736 221 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AL512643.1-201ENST00000635735 524 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AC099654.9-201ENST00000637055 678 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
CLDN6P56747 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
CLDN6P56747 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.84□□□□□ -2.11
CLDN6P56747 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
CLDN6P56747 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms