Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU7-63P-201ENST00000459054 62 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 RNU6-261P-201ENST00000459506 102 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 GMFBP1-201ENST00000467831 427 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 KC877373.1-201ENST00000479066 408 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 RN7SL504P-201ENST00000494496 287 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 RNU6-1282P-201ENST00000516735 96 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 RNU6-928P-201ENST00000516876 104 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 AC098826.3-201ENST00000603823 466 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 AC116312.1-201ENST00000606841 314 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 YWHAEP7-203ENST00000622054 312 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 FER-210ENST00000628534 558 ntTSL 5 BASIC3.26□□□□□ -1.89
HDAC4P56524 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
HDAC4P56524 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HDAC4P56524 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HDAC4P56524 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HDAC4P56524 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HDAC4P56524 UBE2L2-201ENST00000254302 429 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6-288P-201ENST00000363690 104 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 Y_RNA.255-201ENST00000364581 97 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6-996P-201ENST00000365438 107 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 SNORA48.5-201ENST00000391143 135 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6-903P-201ENST00000391270 109 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RN7SKP284-201ENST00000411002 343 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6-387P-201ENST00000411331 105 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AL109913.1-201ENST00000421173 514 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.25□□□□□ -1.89
HDAC4P56524 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.25□□□□□ -1.89
HDAC4P56524 AL591212.2-201ENST00000433923 257 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 MTND4P25-201ENST00000441039 533 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.25□□□□□ -1.89
HDAC4P56524 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.25□□□□□ -1.89
HDAC4P56524 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.25□□□□□ -1.89
HDAC4P56524 AC092798.1-201ENST00000458542 409 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 MTCO3P9-201ENST00000506989 781 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AC117522.3-201ENST00000507974 584 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNA5SP401-201ENST00000515920 127 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNU6-685P-201ENST00000517088 95 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 RNA5SP290-201ENST00000517133 127 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.25□□□□□ -1.89
HDAC4P56524 DNAJC8P1-201ENST00000554535 372 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.25□□□□□ -1.89
HDAC4P56524 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.25□□□□□ -1.89
HDAC4P56524 AC234778.2-201ENST00000566241 354 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 MIR4703-201ENST00000577728 79 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 UBL5P2-201ENST00000583788 219 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AL162413.1-201ENST00000603198 110 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AL035413.2-201ENST00000604801 525 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 YPEL5P2-201ENST00000605553 359 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AC012409.4-201ENST00000612923 249 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AC130324.3-201ENST00000614165 542 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AC002553.4-201ENST00000616896 331 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 U6.114-201ENST00000636407 96 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 AL354685.2-201ENST00000448218 1447 ntBASIC3.25□□□□□ -1.89
HDAC4P56524 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HDAC4P56524 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
HDAC4P56524 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
HDAC4P56524 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HDAC4P56524 CKAP2P1-201ENST00000555477 2049 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.24□□□□□ -1.89
HDAC4P56524 AC103710.2-202ENST00000641454 2853 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC022336.2-201ENST00000568966 2538 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 U3.6-201ENST00000363622 211 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 RNY3P3-201ENST00000363816 102 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 Y_RNA.295-201ENST00000364918 102 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.24□□□□□ -1.89
HDAC4P56524 RNU6-1035P-201ENST00000384477 107 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 RNU6-1068P-201ENST00000410958 103 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC080125.1-201ENST00000414888 684 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.24□□□□□ -1.89
HDAC4P56524 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.24□□□□□ -1.89
HDAC4P56524 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.24□□□□□ -1.89
HDAC4P56524 AC006028.1-201ENST00000438379 402 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.24□□□□□ -1.89
HDAC4P56524 MTND1P18-201ENST00000448191 573 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 snoU13.28-201ENST00000459235 104 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.24□□□□□ -1.89
HDAC4P56524 AL135752.1-201ENST00000479477 471 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AL163973.1-201ENST00000484753 577 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC105417.1-201ENST00000514691 285 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 RNU6-123P-201ENST00000516163 102 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 Y_RNA.689-201ENST00000516589 107 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.24□□□□□ -1.89
HDAC4P56524 AC134698.4-201ENST00000523451 826 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 SUB1P1-201ENST00000524415 382 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms