Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.91□□□□□ -1.78
GFRA1P56159 RNU6-911P-201ENST00000516523 104 ntBASIC3.91□□□□□ -1.78
GFRA1P56159 AC009812.2-201ENST00000517657 457 ntBASIC3.91□□□□□ -1.78
GFRA1P56159 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.91□□□□□ -1.78
GFRA1P56159 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.91□□□□□ -1.78
GFRA1P56159 PARP1P2-201ENST00000556806 195 ntBASIC3.91□□□□□ -1.78
GFRA1P56159 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.91□□□□□ -1.78
GFRA1P56159 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.91□□□□□ -1.78
GFRA1P56159 MIR6134-201ENST00000617606 109 ntBASIC3.91□□□□□ -1.78
GFRA1P56159 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
GFRA1P56159 MIR3653-201ENST00000625572 110 ntBASIC3.91□□□□□ -1.78
GFRA1P56159 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.91□□□□□ -1.78
GFRA1P56159 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.91□□□□□ -1.78
GFRA1P56159 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.91□□□□□ -1.78
GFRA1P56159 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
GFRA1P56159 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.91□□□□□ -1.78
GFRA1P56159 AC027290.2-201ENST00000623210 18662 ntBASIC3.91□□□□□ -1.78
GFRA1P56159 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.91□□□□□ -1.78
GFRA1P56159 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
GFRA1P56159 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
GFRA1P56159 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.9□□□□□ -1.78
GFRA1P56159 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
GFRA1P56159 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.9□□□□□ -1.78
GFRA1P56159 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
GFRA1P56159 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
GFRA1P56159 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RN7SKP280-201ENST00000364196 304 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RNA5SP175-201ENST00000364275 119 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RNU4-50P-201ENST00000364361 141 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RNU6-26P-201ENST00000383985 107 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 SNORA51.11-201ENST00000384442 131 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
GFRA1P56159 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.9□□□□□ -1.79
GFRA1P56159 AL157831.1-201ENST00000426134 473 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RPS6P12-201ENST00000432491 726 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 OSTCP8-201ENST00000445117 448 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RPL26P9-201ENST00000457466 433 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RPL23AP14-201ENST00000468281 468 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 UQCRHP4-201ENST00000471686 272 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.9□□□□□ -1.79
GFRA1P56159 AL592156.1-201ENST00000508758 304 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 AC008958.1-201ENST00000511047 682 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RNU6-928P-201ENST00000516876 104 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 NACAP3-201ENST00000552100 481 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 ATP5J2P6-201ENST00000565203 266 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 AMZ2P1-203ENST00000565833 850 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 AC020895.1-201ENST00000595362 272 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 IPO5P1-202ENST00000600039 287 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 RPS29P30-201ENST00000600975 111 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.9□□□□□ -1.79
GFRA1P56159 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.9□□□□□ -1.79
GFRA1P56159 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GFRA1P56159 AC073308.1-201ENST00000623696 305 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.9□□□□□ -1.79
GFRA1P56159 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
GFRA1P56159 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GFRA1P56159 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
GFRA1P56159 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GFRA1P56159 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.9□□□□□ -1.79
GFRA1P56159 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GFRA1P56159 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
GFRA1P56159 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GFRA1P56159 AC032011.1-201ENST00000611703 1549 ntBASIC3.9□□□□□ -1.79
GFRA1P56159 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
GFRA1P56159 MTND5P7-201ENST00000413558 1798 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
GFRA1P56159 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
GFRA1P56159 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.89□□□□□ -1.79
GFRA1P56159 AC007656.2-201ENST00000624902 4547 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
GFRA1P56159 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.89□□□□□ -1.79
GFRA1P56159 RNU6-713P-201ENST00000384761 107 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.89□□□□□ -1.79
GFRA1P56159 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GFRA1P56159 RNU2-37P-201ENST00000410695 177 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 RN7SKP167-201ENST00000411047 285 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 AC073910.1-201ENST00000445047 438 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 NUTF2P3-201ENST00000448540 384 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 AC125238.1-201ENST00000448842 249 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 AC133473.1-201ENST00000455173 299 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.89□□□□□ -1.79
GFRA1P56159 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.89□□□□□ -1.79
GFRA1P56159 AC105137.1-201ENST00000484355 562 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 AC006445.2-201ENST00000510061 472 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 PARP4P3-201ENST00000510265 317 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 RNA5SP49-201ENST00000516450 115 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.89□□□□□ -1.79
GFRA1P56159 AP003730.1-201ENST00000524605 285 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GFRA1P56159 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.89□□□□□ -1.79
GFRA1P56159 ARF4P1-201ENST00000605447 541 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 HMGB1P50-201ENST00000605814 607 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 FAM27D1-201ENST00000612308 341 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 LINC00901.1-201ENST00000617252 152 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
GFRA1P56159 AC009541.1-201ENST00000438279 2662 ntBASIC3.89□□□□□ -1.79
GFRA1P56159 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms