Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RN7SKP156-201ENST00000410308 342 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 SNORD56-201ENST00000413522 71 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 AC016831.2-201ENST00000417179 352 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SUMO3P55854 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.41□□□□□ -1.86
SUMO3P55854 MTND3P23-201ENST00000431980 347 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.41□□□□□ -1.86
SUMO3P55854 HIGD1AP2-201ENST00000446367 280 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.41□□□□□ -1.86
SUMO3P55854 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SUMO3P55854 snoU109.2-201ENST00000459316 135 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 Y_RNA.687-201ENST00000516558 91 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 AC109479.2-201ENST00000517842 174 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SUMO3P55854 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.41□□□□□ -1.86
SUMO3P55854 COPS8P3-201ENST00000526024 482 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.41□□□□□ -1.86
SUMO3P55854 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.41□□□□□ -1.86
SUMO3P55854 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.41□□□□□ -1.86
SUMO3P55854 AC008121.1-201ENST00000603244 268 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.41□□□□□ -1.86
SUMO3P55854 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.41□□□□□ -1.86
SUMO3P55854 AP000553.6-201ENST00000641242 118 ntBASIC3.41□□□□□ -1.86
SUMO3P55854 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SUMO3P55854 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SUMO3P55854 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
SUMO3P55854 CDC27P3-201ENST00000635418 1910 ntBASIC3.4□□□□□ -1.86
SUMO3P55854 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SUMO3P55854 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SUMO3P55854 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SUMO3P55854 SNORA14A-201ENST00000364773 135 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 Y_RNA.339-201ENST00000365325 102 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
SUMO3P55854 AC074085.1-201ENST00000413598 418 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 RPL7P37-201ENST00000425095 738 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AL645568.3-201ENST00000433683 316 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 MTND1P17-201ENST00000448961 204 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.4□□□□□ -1.87
SUMO3P55854 AL031183.1-201ENST00000457667 207 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.4□□□□□ -1.87
SUMO3P55854 CEP170P1-201ENST00000502249 4587 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.4□□□□□ -1.87
SUMO3P55854 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
SUMO3P55854 AC092436.3-201ENST00000511788 257 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 RPL39P5-202ENST00000512505 151 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.4□□□□□ -1.87
SUMO3P55854 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.4□□□□□ -1.87
SUMO3P55854 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
SUMO3P55854 AL163153.1-201ENST00000554223 283 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 MIR4790-201ENST00000577799 79 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.4□□□□□ -1.87
SUMO3P55854 AC244505.7-201ENST00000599675 272 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.4□□□□□ -1.87
SUMO3P55854 AL670379.10-201ENST00000604330 253 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AL670379.9-201ENST00000605428 253 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 BRDTP1-201ENST00000605735 677 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.4□□□□□ -1.87
SUMO3P55854 AL731566.2-201ENST00000618971 317 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AL359697.1-201ENST00000624879 587 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 AC112487.2-201ENST00000637950 304 ntBASIC3.4□□□□□ -1.87
SUMO3P55854 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SUMO3P55854 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SUMO3P55854 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SUMO3P55854 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SUMO3P55854 GABRG2-229ENST00000641017 3628 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
SUMO3P55854 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SUMO3P55854 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.39□□□□□ -1.87
SUMO3P55854 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.39□□□□□ -1.87
SUMO3P55854 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.39□□□□□ -1.87
SUMO3P55854 Y_RNA.61-201ENST00000362835 102 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 RNA5SP322-201ENST00000363617 119 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC005300.1-201ENST00000428401 373 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 HIGD1AP11-201ENST00000438361 280 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC107399.1-201ENST00000451226 265 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 AC006026.2-201ENST00000457376 180 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 RPL23AP45-201ENST00000476406 468 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.39□□□□□ -1.87
SUMO3P55854 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC096745.1-201ENST00000509945 370 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.39□□□□□ -1.87
SUMO3P55854 SNORD59.2-201ENST00000516873 68 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 RNA5SP143-201ENST00000516936 115 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.39□□□□□ -1.87
SUMO3P55854 AP004607.1-201ENST00000524456 203 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 AP005639.2-201ENST00000527592 928 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC107016.1-201ENST00000550463 337 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.39□□□□□ -1.87
SUMO3P55854 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.39□□□□□ -1.87
SUMO3P55854 MIR3199-2-201ENST00000636243 86 ntBASIC3.39□□□□□ -1.87
SUMO3P55854 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms