Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Y_RNA.466-201ENST00000384294 113 ntBASIC2.6□□□□□ -1.99
VCPP55072 AL162578.1-201ENST00000406202 378 ntBASIC2.6□□□□□ -1.99
VCPP55072 RPL23AP36-201ENST00000413895 458 ntBASIC2.6□□□□□ -1.99
VCPP55072 CYCSP46-201ENST00000423569 204 ntBASIC2.6□□□□□ -1.99
VCPP55072 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.6□□□□□ -1.99
VCPP55072 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VCPP55072 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.6□□□□□ -1.99
VCPP55072 AC096638.1-201ENST00000444678 216 ntBASIC2.6□□□□□ -1.99
VCPP55072 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 SSXP1-201ENST00000453640 473 ntBASIC2.6□□□□□ -1.99
VCPP55072 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VCPP55072 TRBV1-201ENST00000476502 284 ntBASIC2.6□□□□□ -1.99
VCPP55072 AL160314.1-201ENST00000490836 438 ntBASIC2.6□□□□□ -1.99
VCPP55072 AC105252.1-201ENST00000503089 286 ntBASIC2.6□□□□□ -1.99
VCPP55072 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 FABP5P5-201ENST00000515537 406 ntBASIC2.6□□□□□ -1.99
VCPP55072 SCARNA17.1-201ENST00000516211 143 ntBASIC2.6□□□□□ -1.99
VCPP55072 SCARNA17.2-201ENST00000516334 143 ntBASIC2.6□□□□□ -1.99
VCPP55072 RN7SKP258-201ENST00000517151 304 ntBASIC2.6□□□□□ -1.99
VCPP55072 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.6□□□□□ -1.99
VCPP55072 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 MIR548AB-201ENST00000584917 84 ntBASIC2.6□□□□□ -1.99
VCPP55072 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
VCPP55072 AC121247.2-201ENST00000604776 136 ntBASIC2.6□□□□□ -1.99
VCPP55072 AP000860.1-201ENST00000605250 559 ntBASIC2.6□□□□□ -1.99
VCPP55072 RNU6-87P-201ENST00000607561 108 ntBASIC2.6□□□□□ -1.99
VCPP55072 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.6□□□□□ -1.99
VCPP55072 SCARNA17.4-201ENST00000614296 143 ntBASIC2.6□□□□□ -1.99
VCPP55072 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
VCPP55072 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VCPP55072 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.6□□□□□ -1.99
VCPP55072 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
VCPP55072 Z82209.1-201ENST00000422141 2135 ntBASIC2.59□□□□□ -1.99
VCPP55072 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCPP55072 Y_RNA.269-201ENST00000364685 89 ntBASIC2.59□□□□□ -1.99
VCPP55072 RNU6-140P-201ENST00000384566 108 ntBASIC2.59□□□□□ -1.99
VCPP55072 RNY3P9-201ENST00000384727 106 ntBASIC2.59□□□□□ -1.99
VCPP55072 SNORA26.8-201ENST00000391306 124 ntBASIC2.59□□□□□ -1.99
VCPP55072 MORF4L1P6-201ENST00000418771 268 ntBASIC2.59□□□□□ -1.99
VCPP55072 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.59□□□□□ -1.99
VCPP55072 AC006366.1-201ENST00000422002 759 ntBASIC2.59□□□□□ -1.99
VCPP55072 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.59□□□□□ -1.99
VCPP55072 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPP55072 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.59□□□□□ -1.99
VCPP55072 AC013267.1-201ENST00000458227 267 ntBASIC2.59□□□□□ -1.99
VCPP55072 RNU7-26P-201ENST00000458980 63 ntBASIC2.59□□□□□ -1.99
VCPP55072 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPP55072 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPP55072 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPP55072 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.59□□□□□ -1.99
VCPP55072 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.59□□□□□ -1.99
VCPP55072 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VCPP55072 AP003181.2-201ENST00000528941 181 ntBASIC2.59□□□□□ -1.99
VCPP55072 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.59□□□□□ -1.99
VCPP55072 AC006338.1-201ENST00000618453 749 ntBASIC2.59□□□□□ -1.99
VCPP55072 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
VCPP55072 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCPP55072 RNA5SP456-201ENST00000364002 114 ntBASIC2.58□□□□□ -2
VCPP55072 U8.8-201ENST00000365399 135 ntBASIC2.58□□□□□ -2
VCPP55072 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
VCPP55072 AL021407.1-201ENST00000404531 386 ntBASIC2.58□□□□□ -2
VCPP55072 NDUFS5P1-201ENST00000405668 289 ntBASIC2.58□□□□□ -2
VCPP55072 Y_RNA.595-201ENST00000410403 105 ntBASIC2.58□□□□□ -2
VCPP55072 Y_RNA.598-201ENST00000410480 95 ntBASIC2.58□□□□□ -2
VCPP55072 BTF3L4P3-201ENST00000418879 476 ntBASIC2.58□□□□□ -2
VCPP55072 RPS15AP12-201ENST00000419498 388 ntBASIC2.58□□□□□ -2
VCPP55072 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.58□□□□□ -2
VCPP55072 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.58□□□□□ -2
VCPP55072 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.58□□□□□ -2
VCPP55072 MTND1P12-201ENST00000455231 147 ntBASIC2.58□□□□□ -2
VCPP55072 AC233279.1-201ENST00000455300 423 ntBASIC2.58□□□□□ -2
VCPP55072 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.58□□□□□ -2
VCPP55072 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.58□□□□□ -2
VCPP55072 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.58□□□□□ -2
VCPP55072 RPL36AP51-201ENST00000487216 318 ntBASIC2.58□□□□□ -2
VCPP55072 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.58□□□□□ -2
VCPP55072 AC234781.5-201ENST00000508429 271 ntBASIC2.58□□□□□ -2
VCPP55072 HMGB3P3-201ENST00000510526 400 ntBASIC2.58□□□□□ -2
VCPP55072 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
VCPP55072 RNA5SP445-201ENST00000515889 115 ntBASIC2.58□□□□□ -2
VCPP55072 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
VCPP55072 AP003467.2-201ENST00000520175 319 ntBASIC2.58□□□□□ -2
VCPP55072 AP003122.4-201ENST00000530980 758 ntBASIC2.58□□□□□ -2
VCPP55072 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.58□□□□□ -2
VCPP55072 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.58□□□□□ -2
VCPP55072 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.58□□□□□ -2
VCPP55072 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.58□□□□□ -2
VCPP55072 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCPP55072 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.58□□□□□ -2
VCPP55072 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.58□□□□□ -2
VCPP55072 Z99497.2-201ENST00000603634 310 ntBASIC2.58□□□□□ -2
VCPP55072 AP000942.3-201ENST00000603702 160 ntBASIC2.58□□□□□ -2
VCPP55072 AC239868.4-201ENST00000608318 671 ntBASIC2.58□□□□□ -2
VCPP55072 AC103710.2-201ENST00000609912 942 ntBASIC2.58□□□□□ -2
VCPP55072 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
VCPP55072 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms