Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.88□□□□□ -1.95
LBX1P52954 MED13P1-201ENST00000428342 171 ntBASIC2.88□□□□□ -1.95
LBX1P52954 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.88□□□□□ -1.95
LBX1P52954 AC132479.1-201ENST00000449160 144 ntBASIC2.88□□□□□ -1.95
LBX1P52954 SNRPGP6-201ENST00000451124 220 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.88□□□□□ -1.95
LBX1P52954 C1DP4-201ENST00000455429 424 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.88□□□□□ -1.95
LBX1P52954 SNORD97-201ENST00000459187 142 ntBASIC2.88□□□□□ -1.95
LBX1P52954 RPS20P20-201ENST00000460498 340 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AL049874.1-201ENST00000489560 388 ntBASIC2.88□□□□□ -1.95
LBX1P52954 RPL30P5-201ENST00000494923 336 ntBASIC2.88□□□□□ -1.95
LBX1P52954 HMGB1P29-201ENST00000505659 499 ntBASIC2.88□□□□□ -1.95
LBX1P52954 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
LBX1P52954 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.88□□□□□ -1.95
LBX1P52954 RNU6-1256P-201ENST00000516539 103 ntBASIC2.88□□□□□ -1.95
LBX1P52954 RNU6-1092P-201ENST00000516955 87 ntBASIC2.88□□□□□ -1.95
LBX1P52954 HSPE1P18-201ENST00000517602 280 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.88□□□□□ -1.95
LBX1P52954 CASP1P1-201ENST00000526345 212 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC011979.2-201ENST00000527568 352 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.88□□□□□ -1.95
LBX1P52954 AC093012.1-202ENST00000549403 582 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC128657.1-201ENST00000549459 145 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC124947.2-202ENST00000552735 133 ntBASIC2.88□□□□□ -1.95
LBX1P52954 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.88□□□□□ -1.95
LBX1P52954 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.88□□□□□ -1.95
LBX1P52954 AC137800.2-201ENST00000574375 120 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC068790.2-201ENST00000602601 557 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AC146944.4-201ENST00000602697 718 ntBASIC2.88□□□□□ -1.95
LBX1P52954 AL136363.1-201ENST00000605349 337 ntBASIC2.88□□□□□ -1.95
LBX1P52954 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LBX1P52954 AC072046.2-201ENST00000618366 268 ntBASIC2.88□□□□□ -1.95
LBX1P52954 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LBX1P52954 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.88□□□□□ -1.95
LBX1P52954 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.88□□□□□ -1.95
LBX1P52954 AC022336.2-201ENST00000568966 2538 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AC103988.1-201ENST00000566382 2177 ntBASIC2.87□□□□□ -1.95
LBX1P52954 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
LBX1P52954 SNORD56.2-201ENST00000363242 71 ntBASIC2.87□□□□□ -1.95
LBX1P52954 Y_RNA.159-201ENST00000363674 87 ntBASIC2.87□□□□□ -1.95
LBX1P52954 RN7SKP226-201ENST00000364912 300 ntBASIC2.87□□□□□ -1.95
LBX1P52954 RNU6-74P-201ENST00000384235 107 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AL359511.1-201ENST00000402970 211 ntBASIC2.87□□□□□ -1.95
LBX1P52954 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LBX1P52954 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.87□□□□□ -1.95
LBX1P52954 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.87□□□□□ -1.95
LBX1P52954 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.87□□□□□ -1.95
LBX1P52954 TRIAP1P1-201ENST00000427062 225 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AC137499.1-201ENST00000427602 88 ntBASIC2.87□□□□□ -1.95
LBX1P52954 RPL36AP6-201ENST00000435770 321 ntBASIC2.87□□□□□ -1.95
LBX1P52954 BNIP3P2-201ENST00000441221 577 ntBASIC2.87□□□□□ -1.95
LBX1P52954 CBWD4P-201ENST00000445695 655 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.87□□□□□ -1.95
LBX1P52954 AC087588.1-201ENST00000462203 316 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AL049714.1-201ENST00000466686 347 ntBASIC2.87□□□□□ -1.95
LBX1P52954 RPS23P3-201ENST00000470993 430 ntBASIC2.87□□□□□ -1.95
LBX1P52954 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.87□□□□□ -1.95
LBX1P52954 RPL23AP49-201ENST00000492925 468 ntBASIC2.87□□□□□ -1.95
LBX1P52954 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.87□□□□□ -1.95
LBX1P52954 AC114797.1-201ENST00000514003 728 ntBASIC2.87□□□□□ -1.95
LBX1P52954 RNU2-10P-201ENST00000516375 211 ntBASIC2.87□□□□□ -1.95
LBX1P52954 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
LBX1P52954 AC021269.2-201ENST00000532318 330 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AL391840.1-201ENST00000571144 367 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AC024619.4-201ENST00000580924 316 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.87□□□□□ -1.95
LBX1P52954 AC011494.1-201ENST00000596454 237 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AL391646.1-201ENST00000603860 190 ntBASIC2.87□□□□□ -1.95
LBX1P52954 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.87□□□□□ -1.95
LBX1P52954 AC103810.6-201ENST00000606708 136 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.87□□□□□ -1.95
LBX1P52954 AC122108.2-201ENST00000611946 526 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AC008498.1-201ENST00000613012 531 ntBASIC2.87□□□□□ -1.95
LBX1P52954 AP001486.3-201ENST00000615334 372 ntBASIC2.87□□□□□ -1.95
LBX1P52954 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LBX1P52954 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LBX1P52954 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LBX1P52954 AC092447.7-201ENST00000422212 1621 ntBASIC2.86□□□□□ -1.95
LBX1P52954 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LBX1P52954 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LBX1P52954 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LBX1P52954 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.86□□□□□ -1.95
LBX1P52954 RNU6-741P-201ENST00000383889 107 ntBASIC2.86□□□□□ -1.95
LBX1P52954 RNU6-259P-201ENST00000383999 107 ntBASIC2.86□□□□□ -1.95
LBX1P52954 RNU6-278P-201ENST00000390945 109 ntBASIC2.86□□□□□ -1.95
LBX1P52954 NDUFS5P1-201ENST00000405668 289 ntBASIC2.86□□□□□ -1.95
LBX1P52954 USP9YP6-201ENST00000413550 854 ntBASIC2.86□□□□□ -1.95
LBX1P52954 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.86□□□□□ -1.95
LBX1P52954 BX295541.1-201ENST00000417774 250 ntBASIC2.86□□□□□ -1.95
LBX1P52954 ELOCP4-201ENST00000420090 333 ntBASIC2.86□□□□□ -1.95
LBX1P52954 CYCSP49-201ENST00000420810 319 ntBASIC2.86□□□□□ -1.95
LBX1P52954 MTCO2P19-201ENST00000427513 598 ntBASIC2.86□□□□□ -1.95
LBX1P52954 Z98742.2-201ENST00000431564 187 ntBASIC2.86□□□□□ -1.95
LBX1P52954 AL358934.1-201ENST00000432346 324 ntBASIC2.86□□□□□ -1.95
LBX1P52954 AC119618.1-201ENST00000434191 222 ntBASIC2.86□□□□□ -1.95
LBX1P52954 RPS15AP9-201ENST00000439856 381 ntBASIC2.86□□□□□ -1.95
LBX1P52954 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.86□□□□□ -1.95
LBX1P52954 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms