Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SCGB1D5P-201ENST00000515134 247 ntBASIC2.82□□□□□ -1.96
PDX1P52945 RNU6-314P-201ENST00000516574 104 ntBASIC2.82□□□□□ -1.96
PDX1P52945 Y_RNA.704-201ENST00000516851 102 ntBASIC2.82□□□□□ -1.96
PDX1P52945 RNA5SP503-201ENST00000517047 117 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 AP003033.1-201ENST00000527244 415 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AP005435.4-201ENST00000529514 284 ntBASIC2.82□□□□□ -1.96
PDX1P52945 ADI1P3-201ENST00000549509 470 ntBASIC2.82□□□□□ -1.96
PDX1P52945 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.82□□□□□ -1.96
PDX1P52945 AL163153.1-201ENST00000554223 283 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.82□□□□□ -1.96
PDX1P52945 AL391261.3-201ENST00000557194 520 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.82□□□□□ -1.96
PDX1P52945 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 MIR4703-201ENST00000577728 79 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AC174048.1-201ENST00000603389 144 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AC012507.3-201ENST00000603556 477 ntBASIC2.82□□□□□ -1.96
PDX1P52945 BNIP3P9-201ENST00000603714 553 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AC126118.1-201ENST00000607744 628 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AC013412.1-201ENST00000610687 192 ntBASIC2.82□□□□□ -1.96
PDX1P52945 AL138880.2-201ENST00000616214 239 ntBASIC2.82□□□□□ -1.96
PDX1P52945 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.82□□□□□ -1.96
PDX1P52945 SEPT14P19-203ENST00000633205 211 ntBASIC2.82□□□□□ -1.96
PDX1P52945 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.82□□□□□ -1.96
PDX1P52945 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.82□□□□□ -1.96
PDX1P52945 AC022336.2-201ENST00000568966 2538 ntBASIC2.82□□□□□ -1.96
PDX1P52945 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.82□□□□□ -1.96
PDX1P52945 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PDX1P52945 AC008264.2-201ENST00000610193 3731 ntBASIC2.82□□□□□ -1.96
PDX1P52945 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDX1P52945 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
PDX1P52945 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.82□□□□□ -1.96
PDX1P52945 HSPA8P4-201ENST00000511877 1920 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RNU6-517P-201ENST00000384362 110 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RNU6-550P-201ENST00000391057 101 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RNA5SP274-201ENST00000410484 108 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.81□□□□□ -1.96
PDX1P52945 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.81□□□□□ -1.96
PDX1P52945 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.81□□□□□ -1.96
PDX1P52945 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.81□□□□□ -1.96
PDX1P52945 MTCYBP8-201ENST00000422855 651 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDX1P52945 AL160275.3-201ENST00000423876 471 ntBASIC2.81□□□□□ -1.96
PDX1P52945 DPPA2P1-201ENST00000428060 556 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RPL7P54-201ENST00000438336 674 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RPL23AP20-201ENST00000447965 421 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.81□□□□□ -1.96
PDX1P52945 AC027673.1-201ENST00000456245 405 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AL356010.1-201ENST00000456364 102 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AL031183.1-201ENST00000457667 207 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RNU7-63P-201ENST00000459054 62 ntBASIC2.81□□□□□ -1.96
PDX1P52945 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.81□□□□□ -1.96
PDX1P52945 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.81□□□□□ -1.96
PDX1P52945 RPS29P20-201ENST00000489592 171 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC009901.1-201ENST00000506703 541 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.81□□□□□ -1.96
PDX1P52945 SNORA40.12-201ENST00000516329 111 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RNU6-1315P-201ENST00000517187 99 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC009902.1-201ENST00000519351 183 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC104383.1-201ENST00000530297 370 ntBASIC2.81□□□□□ -1.96
PDX1P52945 RANP3-201ENST00000530970 276 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC138761.3-201ENST00000579993 334 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.81□□□□□ -1.96
PDX1P52945 AC024153.1-201ENST00000603103 365 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC107294.3-201ENST00000609211 526 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AL359547.2-201ENST00000615810 418 ntBASIC2.81□□□□□ -1.96
PDX1P52945 AC005609.4-201ENST00000625071 447 ntBASIC2.81□□□□□ -1.96
PDX1P52945 MTND4P5-201ENST00000435821 1374 ntBASIC2.81□□□□□ -1.96
PDX1P52945 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDX1P52945 AL359693.1-201ENST00000614959 2407 ntBASIC2.8□□□□□ -1.96
PDX1P52945 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.8□□□□□ -1.96
PDX1P52945 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
PDX1P52945 RNU4-82P-201ENST00000362443 140 ntBASIC2.8□□□□□ -1.96
PDX1P52945 RNU6-884P-201ENST00000363889 107 ntBASIC2.8□□□□□ -1.96
PDX1P52945 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 DYNLT3P1-201ENST00000378574 347 ntBASIC2.8□□□□□ -1.96
PDX1P52945 RNU6-198P-201ENST00000384258 104 ntBASIC2.8□□□□□ -1.96
PDX1P52945 RNU6-851P-201ENST00000384565 107 ntBASIC2.8□□□□□ -1.96
PDX1P52945 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PDX1P52945 AL139039.1-201ENST00000401900 692 ntBASIC2.8□□□□□ -1.96
PDX1P52945 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 RNU2-68P-201ENST00000410878 191 ntBASIC2.8□□□□□ -1.96
PDX1P52945 RN7SKP284-201ENST00000411002 343 ntBASIC2.8□□□□□ -1.96
PDX1P52945 SKA2P1-201ENST00000425592 390 ntBASIC2.8□□□□□ -1.96
PDX1P52945 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 RPL21P40-201ENST00000428586 483 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AL591704.1-201ENST00000432574 275 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC000111.3-201ENST00000433478 193 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC016691.1-201ENST00000441321 413 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 AC104058.1-201ENST00000448028 297 ntBASIC2.8□□□□□ -1.96
PDX1P52945 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 AC126182.1-201ENST00000478134 357 ntBASIC2.8□□□□□ -1.96
PDX1P52945 RN7SL633P-201ENST00000488974 297 ntBASIC2.8□□□□□ -1.96
PDX1P52945 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 MTCO3P9-201ENST00000506989 781 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 RN7SKP43-201ENST00000516173 320 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms