Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.21□□□□□ -1.74
MRE11P49959 MTND1P17-201ENST00000448961 204 ntBASIC4.21□□□□□ -1.74
MRE11P49959 RPL21P11-201ENST00000461458 483 ntBASIC4.21□□□□□ -1.74
MRE11P49959 RPL9P32-201ENST00000464118 620 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AP002884.2-201ENST00000471647 395 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AC010631.1-201ENST00000474150 156 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AC021205.2-201ENST00000480069 347 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.21□□□□□ -1.74
MRE11P49959 RPS27P27-201ENST00000498779 255 ntBASIC4.21□□□□□ -1.74
MRE11P49959 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MRE11P49959 HIGD1AP13-201ENST00000509878 289 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AC022634.1-201ENST00000520765 532 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AC068657.1-201ENST00000520807 306 ntBASIC4.21□□□□□ -1.74
MRE11P49959 SNRPGP18-201ENST00000553000 214 ntBASIC4.21□□□□□ -1.74
MRE11P49959 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.21□□□□□ -1.74
MRE11P49959 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
MRE11P49959 AC110801.1-201ENST00000623590 212 ntBASIC4.21□□□□□ -1.74
MRE11P49959 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.21□□□□□ -1.74
MRE11P49959 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.21□□□□□ -1.74
MRE11P49959 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.21□□□□□ -1.74
MRE11P49959 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
MRE11P49959 AC068647.1-201ENST00000489539 2265 ntBASIC4.21□□□□□ -1.74
MRE11P49959 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
MRE11P49959 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MRE11P49959 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.21□□□□□ -1.74
MRE11P49959 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MRE11P49959 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MRE11P49959 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MRE11P49959 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.2□□□□□ -1.74
MRE11P49959 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
MRE11P49959 Y_RNA.459-201ENST00000384251 102 ntBASIC4.2□□□□□ -1.74
MRE11P49959 RNA5SP219-201ENST00000390940 113 ntBASIC4.2□□□□□ -1.74
MRE11P49959 RNU6-308P-201ENST00000390957 107 ntBASIC4.2□□□□□ -1.74
MRE11P49959 HSPE1P26-201ENST00000405341 275 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AC244098.2-201ENST00000422068 99 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.2□□□□□ -1.74
MRE11P49959 AL691449.1-201ENST00000426570 421 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.2□□□□□ -1.74
MRE11P49959 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.2□□□□□ -1.74
MRE11P49959 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.2□□□□□ -1.74
MRE11P49959 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.2□□□□□ -1.74
MRE11P49959 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.2□□□□□ -1.74
MRE11P49959 ELOCP24-201ENST00000456370 334 ntBASIC4.2□□□□□ -1.74
MRE11P49959 Y_RNA.653-201ENST00000459091 95 ntBASIC4.2□□□□□ -1.74
MRE11P49959 RN7SL601P-201ENST00000471221 293 ntBASIC4.2□□□□□ -1.74
MRE11P49959 RPL7P42-201ENST00000481005 679 ntBASIC4.2□□□□□ -1.74
MRE11P49959 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MRE11P49959 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.2□□□□□ -1.74
MRE11P49959 RNU6-1046P-201ENST00000516538 107 ntBASIC4.2□□□□□ -1.74
MRE11P49959 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.2□□□□□ -1.74
MRE11P49959 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.2□□□□□ -1.74
MRE11P49959 DNAJC8P1-201ENST00000554535 372 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AC138761.3-201ENST00000579993 334 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AC091167.4-201ENST00000605079 184 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AL121655.1-201ENST00000605811 308 ntBASIC4.2□□□□□ -1.74
MRE11P49959 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AC012409.4-201ENST00000612923 249 ntBASIC4.2□□□□□ -1.74
MRE11P49959 MIR6130-201ENST00000619419 109 ntBASIC4.2□□□□□ -1.74
MRE11P49959 AC022149.2-201ENST00000621061 203 ntBASIC4.2□□□□□ -1.74
MRE11P49959 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
MRE11P49959 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MRE11P49959 MTND5P16-201ENST00000460269 1703 ntBASIC4.2□□□□□ -1.74
MRE11P49959 Y_RNA.135-201ENST00000363439 95 ntBASIC4.19□□□□□ -1.74
MRE11P49959 SNORD116-11-201ENST00000383882 92 ntBASIC4.19□□□□□ -1.74
MRE11P49959 MIR135A2-201ENST00000384854 100 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AL139397.2-201ENST00000404529 772 ntBASIC4.19□□□□□ -1.74
MRE11P49959 BX682237.1-201ENST00000415016 335 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AC245291.1-201ENST00000419501 328 ntBASIC4.19□□□□□ -1.74
MRE11P49959 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.19□□□□□ -1.74
MRE11P49959 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.19□□□□□ -1.74
MRE11P49959 MRPS18BP2-201ENST00000434310 759 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AL137792.2-201ENST00000443484 235 ntBASIC4.19□□□□□ -1.74
MRE11P49959 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.19□□□□□ -1.74
MRE11P49959 DYNLL1P5-201ENST00000467158 270 ntBASIC4.19□□□□□ -1.74
MRE11P49959 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.19□□□□□ -1.74
MRE11P49959 MTCYBP40-201ENST00000509390 1135 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MRE11P49959 AC026801.2-201ENST00000515352 425 ntBASIC4.19□□□□□ -1.74
MRE11P49959 RNA5SP179-201ENST00000517284 121 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.19□□□□□ -1.74
MRE11P49959 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.19□□□□□ -1.74
MRE11P49959 AC018630.1-201ENST00000541376 925 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.19□□□□□ -1.74
MRE11P49959 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.19□□□□□ -1.74
MRE11P49959 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.19□□□□□ -1.74
MRE11P49959 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.19□□□□□ -1.74
MRE11P49959 RPL23AP84-201ENST00000571193 464 ntBASIC4.19□□□□□ -1.74
MRE11P49959 MIR5690-201ENST00000583739 73 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AF038458.1-201ENST00000588406 262 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AC012669.1-201ENST00000603209 283 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AC009570.1-201ENST00000609599 745 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AC004696.1-201ENST00000614345 607 ntBASIC4.19□□□□□ -1.74
MRE11P49959 AC243312.2-201ENST00000623340 601 ntBASIC4.19□□□□□ -1.74
MRE11P49959 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.19□□□□□ -1.74
MRE11P49959 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.19□□□□□ -1.74
MRE11P49959 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRE11P49959 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRE11P49959 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRE11P49959 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.18□□□□□ -1.74
MRE11P49959 MTND5P10-201ENST00000603719 1809 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms