Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC092656.1-203ENST00000624134 423 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 AL512643.1-201ENST00000635735 524 ntBASIC2.55□□□□□ -2
TNFRSF4P43489 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.54□□□□□ -2
TNFRSF4P43489 AC010889.1-201ENST00000566193 2666 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 NACAP2-201ENST00000318548 624 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 RNU5E-1-201ENST00000362477 120 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 SNORA68.1-201ENST00000364537 132 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 RN7SKP226-201ENST00000364912 300 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 DYNLT3P1-201ENST00000378574 347 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 RNU6-946P-201ENST00000383878 107 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 RNU6-190P-201ENST00000384154 102 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 SNORA75-201ENST00000384158 137 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 RNU6-348P-201ENST00000384386 107 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 MIR301A-201ENST00000385261 86 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC127391.1-201ENST00000411737 98 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 CDK8P2-201ENST00000415020 547 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 ELOCP4-201ENST00000420090 333 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC007283.2-201ENST00000424739 197 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
TNFRSF4P43489 PGBD4P3-201ENST00000440731 581 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 DPPA3P1-201ENST00000448050 469 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 MTCO2P18-201ENST00000457151 658 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.54□□□□□ -2
TNFRSF4P43489 KLF3P2-201ENST00000465138 268 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.54□□□□□ -2
TNFRSF4P43489 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.54□□□□□ -2
TNFRSF4P43489 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.54□□□□□ -2
TNFRSF4P43489 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.54□□□□□ -2
TNFRSF4P43489 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.54□□□□□ -2
TNFRSF4P43489 AC098591.2-201ENST00000510152 315 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 MTND3P5-201ENST00000512798 333 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.54□□□□□ -2
TNFRSF4P43489 RNU6-703P-201ENST00000516946 107 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 HMGB1P41-201ENST00000520234 440 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 COX6CP5-201ENST00000527162 228 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.54□□□□□ -2
TNFRSF4P43489 AC009063.1-201ENST00000563342 702 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.54□□□□□ -2
TNFRSF4P43489 AC007151.1-201ENST00000572774 483 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 MIR3913-1-201ENST00000577744 102 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.54□□□□□ -2
TNFRSF4P43489 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.54□□□□□ -2
TNFRSF4P43489 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.54□□□□□ -2
TNFRSF4P43489 AC174048.1-201ENST00000603389 144 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC007938.3-201ENST00000604965 623 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AC103591.3-201ENST00000608684 209 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AL133173.2-201ENST00000614270 90 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 AL359757.2-201ENST00000624309 274 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.54□□□□□ -2
TNFRSF4P43489 Z99571.1-201ENST00000636677 394 ntBASIC2.54□□□□□ -2
TNFRSF4P43489 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
TNFRSF4P43489 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.53□□□□□ -2
TNFRSF4P43489 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.53□□□□□ -2
TNFRSF4P43489 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.53□□□□□ -2
TNFRSF4P43489 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TNFRSF4P43489 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.53□□□□□ -2
TNFRSF4P43489 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TNFRSF4P43489 AC073343.1-201ENST00000328239 651 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 U8.3-201ENST00000363321 132 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 RNU6-188P-201ENST00000364207 107 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 OR5H15-201ENST00000383696 930 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 RNU6-1119P-201ENST00000384349 108 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 RPL23AP32-201ENST00000395315 459 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 DEFB108C-201ENST00000400154 252 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 RNU6-248P-201ENST00000410720 107 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.53□□□□□ -2
TNFRSF4P43489 C1DP2-201ENST00000418167 426 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 MORF4L1P6-201ENST00000418771 268 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 VN1R108P-201ENST00000431580 830 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.53□□□□□ -2
TNFRSF4P43489 AC244505.4-201ENST00000434905 287 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 RPS15AP7-201ENST00000439294 405 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 SSXP5-201ENST00000443473 287 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 OSTCP8-201ENST00000445117 448 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 GAPDHP17-201ENST00000449858 1001 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.53□□□□□ -2
TNFRSF4P43489 RPS15AP34-201ENST00000487776 387 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AC007182.2-201ENST00000489251 402 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 ANXA2P1-201ENST00000505539 926 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.53□□□□□ -2
TNFRSF4P43489 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.53□□□□□ -2
TNFRSF4P43489 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.53□□□□□ -2
TNFRSF4P43489 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.53□□□□□ -2
TNFRSF4P43489 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.53□□□□□ -2
TNFRSF4P43489 AC012213.3-201ENST00000577199 777 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.53□□□□□ -2
TNFRSF4P43489 OR1M4P-201ENST00000589199 287 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AC090578.1-201ENST00000604955 591 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AP002360.4-201ENST00000606980 481 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AC022893.3-201ENST00000607665 437 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 AL161734.1-201ENST00000609720 557 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 PISRT1-201ENST00000626175 531 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 U6.99-201ENST00000637524 83 ntBASIC2.53□□□□□ -2
TNFRSF4P43489 MIR7515-201ENST00000637837 67 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms