Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.86□□□□□ -1.95
HNF4AP41235 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.86□□□□□ -1.95
HNF4AP41235 AL136380.1-201ENST00000447970 162 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC003071.1-201ENST00000451219 789 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.86□□□□□ -1.95
HNF4AP41235 FABP5P15-201ENST00000453566 214 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC103975.1-201ENST00000482506 483 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC009646.1-201ENST00000510455 318 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC008716.1-201ENST00000511084 513 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.86□□□□□ -1.95
HNF4AP41235 SNORA31.3-201ENST00000516029 96 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC109329.2-201ENST00000519658 482 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HNF4AP41235 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.86□□□□□ -1.95
HNF4AP41235 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.86□□□□□ -1.95
HNF4AP41235 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.86□□□□□ -1.95
HNF4AP41235 ZNF519P2-201ENST00000557032 169 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC007151.1-201ENST00000572774 483 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC138761.3-201ENST00000579993 334 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.86□□□□□ -1.95
HNF4AP41235 AL359880.1-201ENST00000621879 266 ntBASIC2.86□□□□□ -1.95
HNF4AP41235 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.86□□□□□ -1.95
HNF4AP41235 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HNF4AP41235 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.86□□□□□ -1.95
HNF4AP41235 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HNF4AP41235 AC004520.1-201ENST00000608362 1413 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 UBE2L2-201ENST00000254302 429 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.85□□□□□ -1.95
HNF4AP41235 Y_RNA.1-201ENST00000352915 104 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HNF4AP41235 AL138885.1-201ENST00000405921 675 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.85□□□□□ -1.95
HNF4AP41235 ELOCP4-201ENST00000420090 333 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.85□□□□□ -1.95
HNF4AP41235 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.85□□□□□ -1.95
HNF4AP41235 AC002486.1-201ENST00000435098 391 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.85□□□□□ -1.95
HNF4AP41235 MTCO2P29-201ENST00000465212 189 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AL121769.1-201ENST00000469473 401 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC007182.2-201ENST00000489251 402 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC019235.1-201ENST00000503847 207 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC090572.1-201ENST00000519251 160 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HNF4AP41235 AP002404.1-201ENST00000532005 451 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.85□□□□□ -1.95
HNF4AP41235 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.85□□□□□ -1.95
HNF4AP41235 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.85□□□□□ -1.95
HNF4AP41235 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.85□□□□□ -1.95
HNF4AP41235 AC008277.2-201ENST00000605196 797 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC107871.2-201ENST00000612894 502 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 AC073534.2-201ENST00000620377 381 ntBASIC2.85□□□□□ -1.95
HNF4AP41235 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.85□□□□□ -1.95
HNF4AP41235 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HNF4AP41235 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HNF4AP41235 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HNF4AP41235 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.85□□□□□ -1.95
HNF4AP41235 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
HNF4AP41235 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.84□□□□□ -1.95
HNF4AP41235 VTRNA1-1-201ENST00000363120 99 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 MIR128-1-201ENST00000384921 82 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 SNORD115-47-201ENST00000391226 86 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HNF4AP41235 AL139397.2-201ENST00000404529 772 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 BTF3P7-201ENST00000407097 488 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.84□□□□□ -1.95
HNF4AP41235 MTND1P23-201ENST00000416931 372 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AL353193.1-201ENST00000421444 268 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 MTCYBP5-201ENST00000423752 1135 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 USP9YP18-201ENST00000425912 695 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AC073464.1-201ENST00000429823 534 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 RPS15AP9-201ENST00000439856 381 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AC093156.1-201ENST00000440382 670 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.84□□□□□ -1.95
HNF4AP41235 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.84□□□□□ -1.95
HNF4AP41235 AC109927.2-201ENST00000506416 303 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
HNF4AP41235 AC010493.1-201ENST00000513479 292 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 SNORD19.2-201ENST00000516978 73 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AP001893.2-201ENST00000526949 202 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AK6P1-201ENST00000540219 478 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 AC022080.3-201ENST00000544433 482 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 MIR3200-201ENST00000580767 85 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 MIR4801-201ENST00000582704 82 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HNF4AP41235 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.84□□□□□ -1.95
HNF4AP41235 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HNF4AP41235 AL365361.1-201ENST00000566942 3481 ntBASIC2.84□□□□□ -1.95
HNF4AP41235 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HNF4AP41235 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.96
HNF4AP41235 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.83□□□□□ -1.96
HNF4AP41235 ADAM3A-203ENST00000461344 2157 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RNU6-512P-201ENST00000364438 103 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 Y_RNA.248-201ENST00000364501 109 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RNU6-39P-201ENST00000384344 107 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
HNF4AP41235 SNORA48.2-201ENST00000390926 124 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms