Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.65□□□□□ -2.14
COL18A1P39060 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.65□□□□□ -2.14
COL18A1P39060 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.65□□□□□ -2.14
COL18A1P39060 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.65□□□□□ -2.14
COL18A1P39060 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.65□□□□□ -2.14
COL18A1P39060 NDUFB4P2-201ENST00000509515 391 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 RNU6-467P-201ENST00000517027 110 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.65□□□□□ -2.14
COL18A1P39060 DEFB131D-201ENST00000526803 184 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.65□□□□□ -2.14
COL18A1P39060 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.65□□□□□ -2.14
COL18A1P39060 OR6C7P-201ENST00000547875 934 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AL512347.1-201ENST00000566420 503 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AC104072.1-201ENST00000568817 668 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AL139344.1-201ENST00000605228 195 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AC112220.2-201ENST00000605513 533 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.65□□□□□ -2.14
COL18A1P39060 MTND4P27-201ENST00000450813 1354 ntBASIC1.65□□□□□ -2.14
COL18A1P39060 SNORD114-27-201ENST00000363766 70 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 Y_RNA.234-201ENST00000364409 97 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 SNORA23-201ENST00000365128 182 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 RNU6-1072P-201ENST00000384703 107 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 RNU6-443P-201ENST00000384780 107 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AL033519.2-201ENST00000403958 392 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 CCNG1P1-201ENST00000406783 885 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC068533.2-201ENST00000411872 306 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC069282.1-201ENST00000411911 526 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC007098.1-201ENST00000420122 367 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC007560.1-201ENST00000426912 237 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC007919.1-201ENST00000429380 217 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 GTF2IP20-201ENST00000431663 360 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.64□□□□□ -2.15
COL18A1P39060 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.64□□□□□ -2.15
COL18A1P39060 ATG12P2-201ENST00000456830 416 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 RPL23AP41-201ENST00000484754 458 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC022447.3-201ENST00000506865 495 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 SCARNA11.3-201ENST00000517276 130 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC022634.1-201ENST00000520765 532 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.64□□□□□ -2.15
COL18A1P39060 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL18A1P39060 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.64□□□□□ -2.15
COL18A1P39060 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.64□□□□□ -2.15
COL18A1P39060 AC025594.3-201ENST00000613068 790 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC009902.3-201ENST00000606235 2172 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.64□□□□□ -2.15
COL18A1P39060 AC010329.5-201ENST00000623497 2174 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 RNU6-203P-201ENST00000384038 104 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 MIR222-201ENST00000384992 110 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 RNU6-298P-201ENST00000390888 96 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AL590084.2-201ENST00000401481 382 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 MTND5P14-201ENST00000441481 1267 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL18A1P39060 EIF4EP3-201ENST00000498782 656 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.64□□□□□ -2.15
COL18A1P39060 HMGB3P3-201ENST00000510526 400 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC090821.2-201ENST00000523552 176 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AP000907.2-201ENST00000530827 353 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.64□□□□□ -2.15
COL18A1P39060 ANP32BP3-201ENST00000559213 706 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC007151.1-201ENST00000572774 483 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC073413.2-201ENST00000604332 360 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC135507.1-201ENST00000607214 561 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 AC123767.1-202ENST00000620407 817 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.64□□□□□ -2.15
COL18A1P39060 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL18A1P39060 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 MTND5P10-201ENST00000603719 1809 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL18A1P39060 RNU6-432P-201ENST00000384196 109 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 RNU6-1257P-201ENST00000384625 110 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 RPL26P9-201ENST00000457466 433 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 AC104563.1-201ENST00000476147 376 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 AC093752.1-206ENST00000511823 336 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.63□□□□□ -2.15
COL18A1P39060 AP003497.1-201ENST00000528472 562 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 OR4R1P-201ENST00000529879 463 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.63□□□□□ -2.15
COL18A1P39060 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.63□□□□□ -2.15
COL18A1P39060 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.63□□□□□ -2.15
COL18A1P39060 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.63□□□□□ -2.15
COL18A1P39060 AC002545.1-201ENST00000592511 181 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 RPS15AP11-201ENST00000594193 385 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 AL138478.1-201ENST00000612252 832 ntBASIC1.63□□□□□ -2.15
COL18A1P39060 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL18A1P39060 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL18A1P39060 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL18A1P39060 RNU6-884P-201ENST00000363889 107 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 RNU6-114P-201ENST00000384704 105 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 RNU6-750P-201ENST00000390946 107 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 MTCYBP38-201ENST00000417160 1123 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.62□□□□□ -2.15
COL18A1P39060 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.62□□□□□ -2.15
COL18A1P39060 AL078601.1-201ENST00000444542 271 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.62□□□□□ -2.15
COL18A1P39060 RNU7-26P-201ENST00000458980 63 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC021382.1-201ENST00000483523 359 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL18A1P39060 RNU5F-8P-201ENST00000515941 111 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms