Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.12□□□□□ -2.07
RORAP35398 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
RORAP35398 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RORAP35398 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RORAP35398 ADAM3A-203ENST00000461344 2157 ntBASIC2.11□□□□□ -2.07
RORAP35398 SNORA72.3-201ENST00000365074 132 ntBASIC2.11□□□□□ -2.07
RORAP35398 RNY3P13-201ENST00000365542 102 ntBASIC2.11□□□□□ -2.07
RORAP35398 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
RORAP35398 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
RORAP35398 RNU6-809P-201ENST00000384461 107 ntBASIC2.11□□□□□ -2.07
RORAP35398 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RORAP35398 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RORAP35398 RNU4-26P-201ENST00000410270 107 ntBASIC2.11□□□□□ -2.07
RORAP35398 RNU2-36P-201ENST00000410361 191 ntBASIC2.11□□□□□ -2.07
RORAP35398 AL353777.1-201ENST00000425552 326 ntBASIC2.11□□□□□ -2.07
RORAP35398 GPM6BP3-201ENST00000442797 145 ntBASIC2.11□□□□□ -2.07
RORAP35398 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.11□□□□□ -2.07
RORAP35398 FTH1P25-201ENST00000447665 469 ntBASIC2.11□□□□□ -2.07
RORAP35398 HMGN2P10-201ENST00000448085 265 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.11□□□□□ -2.07
RORAP35398 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC026801.1-201ENST00000497178 464 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.11□□□□□ -2.07
RORAP35398 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.11□□□□□ -2.07
RORAP35398 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
RORAP35398 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
RORAP35398 SNORD19.2-201ENST00000516978 73 ntBASIC2.11□□□□□ -2.07
RORAP35398 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
RORAP35398 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.11□□□□□ -2.07
RORAP35398 RPS3AP4-201ENST00000555161 764 ntBASIC2.11□□□□□ -2.07
RORAP35398 ZNF519P3-201ENST00000557158 1032 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.11□□□□□ -2.07
RORAP35398 AC073544.2-201ENST00000601155 540 ntBASIC2.11□□□□□ -2.07
RORAP35398 AL391813.1-201ENST00000603098 260 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.11□□□□□ -2.07
RORAP35398 AC011939.3-201ENST00000613686 466 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.11□□□□□ -2.07
RORAP35398 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.11□□□□□ -2.07
RORAP35398 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
RORAP35398 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.11□□□□□ -2.07
RORAP35398 AC104454.1-201ENST00000421341 1401 ntBASIC2.1□□□□□ -2.07
RORAP35398 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
RORAP35398 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.1□□□□□ -2.07
RORAP35398 RNU6-500P-201ENST00000362349 107 ntBASIC2.1□□□□□ -2.07
RORAP35398 RNY4P16-201ENST00000364768 94 ntBASIC2.1□□□□□ -2.07
RORAP35398 RNA5SP125-201ENST00000364843 120 ntBASIC2.1□□□□□ -2.07
RORAP35398 SMIM11P1-201ENST00000369586 178 ntBASIC2.1□□□□□ -2.07
RORAP35398 RNU6-658P-201ENST00000384606 106 ntBASIC2.1□□□□□ -2.07
RORAP35398 U3.40-201ENST00000408706 208 ntBASIC2.1□□□□□ -2.07
RORAP35398 AL109913.1-201ENST00000421173 514 ntBASIC2.1□□□□□ -2.07
RORAP35398 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.1□□□□□ -2.07
RORAP35398 RPS27AP14-201ENST00000422868 454 ntBASIC2.1□□□□□ -2.07
RORAP35398 BX276092.3-201ENST00000424182 230 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC093106.2-201ENST00000428212 385 ntBASIC2.1□□□□□ -2.07
RORAP35398 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.1□□□□□ -2.07
RORAP35398 HMGB3P12-201ENST00000438745 556 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.1□□□□□ -2.07
RORAP35398 KLF3P2-201ENST00000465138 268 ntBASIC2.1□□□□□ -2.07
RORAP35398 UBL5P3-201ENST00000475112 231 ntBASIC2.1□□□□□ -2.07
RORAP35398 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.1□□□□□ -2.07
RORAP35398 AC116347.2-201ENST00000514912 523 ntBASIC2.1□□□□□ -2.07
RORAP35398 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.1□□□□□ -2.07
RORAP35398 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RORAP35398 AP003461.1-201ENST00000528866 78 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC006199.1-201ENST00000548728 219 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.1□□□□□ -2.07
RORAP35398 AC021739.1-201ENST00000559631 174 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.1□□□□□ -2.07
RORAP35398 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.1□□□□□ -2.07
RORAP35398 AP000240.1-201ENST00000609910 452 ntBASIC2.1□□□□□ -2.07
RORAP35398 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC009090.3-201ENST00000616553 565 ntBASIC2.1□□□□□ -2.07
RORAP35398 AC068787.1-201ENST00000623908 691 ntBASIC2.1□□□□□ -2.07
RORAP35398 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RORAP35398 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.1□□□□□ -2.07
RORAP35398 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.1□□□□□ -2.07
RORAP35398 CKAP2P1-201ENST00000555477 2049 ntBASIC2.1□□□□□ -2.07
RORAP35398 MTND4P1-201ENST00000457501 1466 ntBASIC2.09□□□□□ -2.07
RORAP35398 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RORAP35398 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.09□□□□□ -2.07
RORAP35398 Z98749.2-208ENST00000381646 500 ntBASIC2.09□□□□□ -2.07
RORAP35398 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
RORAP35398 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
RORAP35398 FCF1P10-201ENST00000407590 479 ntBASIC2.09□□□□□ -2.07
RORAP35398 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.09□□□□□ -2.07
RORAP35398 ELOCP17-201ENST00000414751 326 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.09□□□□□ -2.07
RORAP35398 AL593851.1-201ENST00000426171 157 ntBASIC2.09□□□□□ -2.07
RORAP35398 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.09□□□□□ -2.07
RORAP35398 AL592045.1-201ENST00000429867 352 ntBASIC2.09□□□□□ -2.07
RORAP35398 RPL37P21-201ENST00000435890 276 ntBASIC2.09□□□□□ -2.07
RORAP35398 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.09□□□□□ -2.07
RORAP35398 AC118469.1-201ENST00000442943 488 ntBASIC2.09□□□□□ -2.07
RORAP35398 NEFMP1-201ENST00000443423 1006 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC080013.2-201ENST00000460866 323 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
RORAP35398 GZMAP1-201ENST00000503054 631 ntBASIC2.09□□□□□ -2.07
RORAP35398 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms