Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
GPC1P35052 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GPC1P35052 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GPC1P35052 Y_RNA.71-201ENST00000362892 104 ntBASIC4.77□□□□□ -1.65
GPC1P35052 RNA5SP197-201ENST00000363357 119 ntBASIC4.77□□□□□ -1.65
GPC1P35052 SNORA20-201ENST00000384662 132 ntBASIC4.77□□□□□ -1.65
GPC1P35052 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GPC1P35052 U3.37-201ENST00000408528 213 ntBASIC4.77□□□□□ -1.65
GPC1P35052 RN7SKP16-201ENST00000410180 299 ntBASIC4.77□□□□□ -1.65
GPC1P35052 Y_RNA.595-201ENST00000410403 105 ntBASIC4.77□□□□□ -1.65
GPC1P35052 ELOCP19-201ENST00000411919 318 ntBASIC4.77□□□□□ -1.65
GPC1P35052 BX510359.3-201ENST00000422168 306 ntBASIC4.77□□□□□ -1.65
GPC1P35052 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.77□□□□□ -1.65
GPC1P35052 AL356867.1-201ENST00000429623 299 ntBASIC4.77□□□□□ -1.65
GPC1P35052 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.77□□□□□ -1.65
GPC1P35052 RNU6-1211P-201ENST00000459179 105 ntBASIC4.77□□□□□ -1.65
GPC1P35052 UBE2CP3-201ENST00000502715 450 ntBASIC4.77□□□□□ -1.65
GPC1P35052 RNU6-966P-201ENST00000516479 104 ntBASIC4.77□□□□□ -1.65
GPC1P35052 RN7SKP260-201ENST00000516907 149 ntBASIC4.77□□□□□ -1.65
GPC1P35052 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.77□□□□□ -1.65
GPC1P35052 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.77□□□□□ -1.65
GPC1P35052 AC105254.2-201ENST00000603636 436 ntBASIC4.77□□□□□ -1.65
GPC1P35052 IMMP1LP3-201ENST00000604197 224 ntBASIC4.77□□□□□ -1.65
GPC1P35052 RPSAP73-201ENST00000614820 330 ntBASIC4.77□□□□□ -1.65
GPC1P35052 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.77□□□□□ -1.65
GPC1P35052 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.76□□□□□ -1.65
GPC1P35052 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.76□□□□□ -1.65
GPC1P35052 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
GPC1P35052 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.76□□□□□ -1.65
GPC1P35052 RNU6-1272P-201ENST00000362776 107 ntBASIC4.76□□□□□ -1.65
GPC1P35052 U3.2-201ENST00000362981 210 ntBASIC4.76□□□□□ -1.65
GPC1P35052 Y_RNA.121-201ENST00000363309 113 ntBASIC4.76□□□□□ -1.65
GPC1P35052 RNU1-140P-201ENST00000365040 165 ntBASIC4.76□□□□□ -1.65
GPC1P35052 RNU6-239P-201ENST00000390990 99 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AL078599.1-201ENST00000402075 293 ntBASIC4.76□□□□□ -1.65
GPC1P35052 MTHFD2P2-201ENST00000407725 247 ntBASIC4.76□□□□□ -1.65
GPC1P35052 MIR1286-201ENST00000408112 78 ntBASIC4.76□□□□□ -1.65
GPC1P35052 MTND4LP9-201ENST00000427694 174 ntBASIC4.76□□□□□ -1.65
GPC1P35052 RPS20P10-201ENST00000451209 253 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AC006026.2-201ENST00000457376 180 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AL132838.2-201ENST00000492041 314 ntBASIC4.76□□□□□ -1.65
GPC1P35052 RN7SL441P-201ENST00000492388 296 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.76□□□□□ -1.65
GPC1P35052 Y_RNA.797-201ENST00000515977 94 ntBASIC4.76□□□□□ -1.65
GPC1P35052 RNU6-1234P-201ENST00000516877 103 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AP004607.1-201ENST00000524456 203 ntBASIC4.76□□□□□ -1.65
GPC1P35052 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GPC1P35052 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
GPC1P35052 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.76□□□□□ -1.65
GPC1P35052 MIR3176-201ENST00000582210 90 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AC053481.4-201ENST00000583164 216 ntBASIC4.76□□□□□ -1.65
GPC1P35052 RN7SL435P-201ENST00000584418 282 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.76□□□□□ -1.65
GPC1P35052 AC024153.1-201ENST00000603103 365 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AP005432.2-201ENST00000608162 586 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.76□□□□□ -1.65
GPC1P35052 AC110774.1-201ENST00000623567 2018 ntBASIC4.76□□□□□ -1.65
GPC1P35052 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.76□□□□□ -1.65
GPC1P35052 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.76□□□□□ -1.65
GPC1P35052 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.76□□□□□ -1.65
GPC1P35052 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.76□□□□□ -1.65
GPC1P35052 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
GPC1P35052 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.76□□□□□ -1.65
GPC1P35052 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.76□□□□□ -1.65
GPC1P35052 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
GPC1P35052 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
GPC1P35052 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
GPC1P35052 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
GPC1P35052 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GPC1P35052 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
GPC1P35052 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GPC1P35052 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
GPC1P35052 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
GPC1P35052 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.75□□□□□ -1.65
GPC1P35052 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.75□□□□□ -1.65
GPC1P35052 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GPC1P35052 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.75□□□□□ -1.65
GPC1P35052 RNU5B-2P-201ENST00000363036 113 ntBASIC4.75□□□□□ -1.65
GPC1P35052 SNORD116-14-201ENST00000383894 92 ntBASIC4.75□□□□□ -1.65
GPC1P35052 SNORD116-17-201ENST00000383929 92 ntBASIC4.75□□□□□ -1.65
GPC1P35052 SNORD116-15-201ENST00000384445 92 ntBASIC4.75□□□□□ -1.65
GPC1P35052 SNORA70.10-201ENST00000384515 134 ntBASIC4.75□□□□□ -1.65
GPC1P35052 SNORD116-20-201ENST00000384529 92 ntBASIC4.75□□□□□ -1.65
GPC1P35052 SNORD116-19-201ENST00000384729 92 ntBASIC4.75□□□□□ -1.65
GPC1P35052 MIR1271-201ENST00000408537 86 ntBASIC4.75□□□□□ -1.65
GPC1P35052 RNU2-52P-201ENST00000410680 190 ntBASIC4.75□□□□□ -1.65
GPC1P35052 RNA5SP31-201ENST00000411144 127 ntBASIC4.75□□□□□ -1.65
GPC1P35052 OR2AH1P-201ENST00000425717 928 ntBASIC4.75□□□□□ -1.65
GPC1P35052 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.75□□□□□ -1.65
GPC1P35052 RPL35AP21-201ENST00000437667 333 ntBASIC4.75□□□□□ -1.65
GPC1P35052 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.75□□□□□ -1.65
GPC1P35052 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.75□□□□□ -1.65
GPC1P35052 RN7SL30P-201ENST00000488416 306 ntBASIC4.75□□□□□ -1.65
GPC1P35052 RN7SL629P-201ENST00000489622 285 ntBASIC4.75□□□□□ -1.65
GPC1P35052 AC020890.1-201ENST00000491837 504 ntBASIC4.75□□□□□ -1.65
GPC1P35052 SNORA31.20-201ENST00000517111 133 ntBASIC4.75□□□□□ -1.65
GPC1P35052 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.75□□□□□ -1.65
GPC1P35052 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.75□□□□□ -1.65
GPC1P35052 AC007225.2-201ENST00000562529 256 ntBASIC4.75□□□□□ -1.65
GPC1P35052 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms