Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL161670.1-201ENST00000554348 137 ntBASIC0.83□□□□□ -2.28
CKS2P33552 RPL21P5-201ENST00000554662 472 ntBASIC0.83□□□□□ -2.28
CKS2P33552 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.83□□□□□ -2.28
CKS2P33552 AL390208.1-201ENST00000605885 644 ntBASIC0.83□□□□□ -2.28
CKS2P33552 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.83□□□□□ -2.28
CKS2P33552 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.82□□□□□ -2.28
CKS2P33552 RNU1-58P-201ENST00000362413 163 ntBASIC0.82□□□□□ -2.28
CKS2P33552 RNU6-271P-201ENST00000363858 105 ntBASIC0.82□□□□□ -2.28
CKS2P33552 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CKS2P33552 MIR513A1-201ENST00000385138 129 ntBASIC0.82□□□□□ -2.28
CKS2P33552 SNORA67.5-201ENST00000391036 107 ntBASIC0.82□□□□□ -2.28
CKS2P33552 DHFRP6-201ENST00000401776 268 ntBASIC0.82□□□□□ -2.28
CKS2P33552 LUZP4P1-201ENST00000415420 344 ntBASIC0.82□□□□□ -2.28
CKS2P33552 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.82□□□□□ -2.28
CKS2P33552 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.82□□□□□ -2.28
CKS2P33552 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CKS2P33552 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS2P33552 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS2P33552 BX322784.1-201ENST00000455793 1077 ntBASIC0.82□□□□□ -2.28
CKS2P33552 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS2P33552 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS2P33552 snoU13.9-201ENST00000458927 103 ntBASIC0.82□□□□□ -2.28
CKS2P33552 RPL21P47-201ENST00000483696 477 ntBASIC0.82□□□□□ -2.28
CKS2P33552 AC132942.1-201ENST00000486753 483 ntBASIC0.82□□□□□ -2.28
CKS2P33552 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS2P33552 MTND4P2-201ENST00000507767 1203 ntBASIC0.82□□□□□ -2.28
CKS2P33552 RNU6-927P-201ENST00000516199 100 ntBASIC0.82□□□□□ -2.28
CKS2P33552 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CKS2P33552 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.82□□□□□ -2.28
CKS2P33552 AC067805.1-201ENST00000559344 470 ntBASIC0.82□□□□□ -2.28
CKS2P33552 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.82□□□□□ -2.28
CKS2P33552 MIR4666A-201ENST00000580160 79 ntBASIC0.82□□□□□ -2.28
CKS2P33552 MIR4295-201ENST00000585286 85 ntBASIC0.82□□□□□ -2.28
CKS2P33552 RN7SL622P-201ENST00000585292 275 ntBASIC0.82□□□□□ -2.28
CKS2P33552 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.82□□□□□ -2.28
CKS2P33552 CLIC4P2-201ENST00000601934 717 ntBASIC0.82□□□□□ -2.28
CKS2P33552 AC073413.2-201ENST00000604332 360 ntBASIC0.82□□□□□ -2.28
CKS2P33552 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.82□□□□□ -2.28
CKS2P33552 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CKS2P33552 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CKS2P33552 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CKS2P33552 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
CKS2P33552 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CKS2P33552 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CKS2P33552 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.81□□□□□ -2.28
CKS2P33552 CBX3P1-201ENST00000325243 554 ntBASIC0.81□□□□□ -2.28
CKS2P33552 RNU6-1066P-201ENST00000363573 105 ntBASIC0.81□□□□□ -2.28
CKS2P33552 RNU6-353P-201ENST00000364266 108 ntBASIC0.81□□□□□ -2.28
CKS2P33552 Y_RNA.234-201ENST00000364409 97 ntBASIC0.81□□□□□ -2.28
CKS2P33552 RNU6-1078P-201ENST00000364522 103 ntBASIC0.81□□□□□ -2.28
CKS2P33552 MIR506-201ENST00000384998 124 ntBASIC0.81□□□□□ -2.28
CKS2P33552 SNORA48.1-201ENST00000390879 135 ntBASIC0.81□□□□□ -2.28
CKS2P33552 SNORA26.9-201ENST00000391322 122 ntBASIC0.81□□□□□ -2.28
CKS2P33552 BTF3L4P3-201ENST00000418879 476 ntBASIC0.81□□□□□ -2.28
CKS2P33552 MRPL35P3-201ENST00000421557 364 ntBASIC0.81□□□□□ -2.28
CKS2P33552 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.81□□□□□ -2.28
CKS2P33552 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.81□□□□□ -2.28
CKS2P33552 RPS15AP9-201ENST00000439856 381 ntBASIC0.81□□□□□ -2.28
CKS2P33552 RNFT1P2-201ENST00000443064 757 ntBASIC0.81□□□□□ -2.28
CKS2P33552 RPS29P29-201ENST00000456396 171 ntBASIC0.81□□□□□ -2.28
CKS2P33552 AC112492.4-201ENST00000456549 352 ntBASIC0.81□□□□□ -2.28
CKS2P33552 PRELID3BP1-201ENST00000457142 540 ntBASIC0.81□□□□□ -2.28
CKS2P33552 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.81□□□□□ -2.28
CKS2P33552 SNORD13-201ENST00000459299 104 ntBASIC0.81□□□□□ -2.28
CKS2P33552 AC139453.3-201ENST00000493276 369 ntBASIC0.81□□□□□ -2.28
CKS2P33552 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.81□□□□□ -2.28
CKS2P33552 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.81□□□□□ -2.28
CKS2P33552 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.81□□□□□ -2.28
CKS2P33552 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.81□□□□□ -2.28
CKS2P33552 AC117522.2-201ENST00000510049 657 ntBASIC0.81□□□□□ -2.28
CKS2P33552 ACA59.2-201ENST00000517061 156 ntBASIC0.81□□□□□ -2.28
CKS2P33552 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
CKS2P33552 AC022861.1-201ENST00000522981 663 ntBASIC0.81□□□□□ -2.28
CKS2P33552 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.81□□□□□ -2.28
CKS2P33552 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.81□□□□□ -2.28
CKS2P33552 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.81□□□□□ -2.28
CKS2P33552 MRPS36P5-201ENST00000551909 298 ntBASIC0.81□□□□□ -2.28
CKS2P33552 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.81□□□□□ -2.28
CKS2P33552 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.81□□□□□ -2.28
CKS2P33552 ADAM3B-201ENST00000569937 840 ntBASIC0.81□□□□□ -2.28
CKS2P33552 MIR4637-201ENST00000582405 84 ntBASIC0.81□□□□□ -2.28
CKS2P33552 MIR3660-201ENST00000584845 100 ntBASIC0.81□□□□□ -2.28
CKS2P33552 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.81□□□□□ -2.28
CKS2P33552 CYP2C61P-201ENST00000604072 290 ntBASIC0.81□□□□□ -2.28
CKS2P33552 AC087045.1-201ENST00000605856 382 ntBASIC0.81□□□□□ -2.28
CKS2P33552 NACAP2-201ENST00000318548 624 ntBASIC0.8□□□□□ -2.28
CKS2P33552 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CKS2P33552 AL133475.1-201ENST00000404414 305 ntBASIC0.8□□□□□ -2.28
CKS2P33552 TXNP7-201ENST00000406296 293 ntBASIC0.8□□□□□ -2.28
CKS2P33552 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.8□□□□□ -2.28
CKS2P33552 RPS27P16-201ENST00000425758 201 ntBASIC0.8□□□□□ -2.28
CKS2P33552 CR769776.1-201ENST00000441254 787 ntBASIC0.8□□□□□ -2.28
CKS2P33552 DYNLT3P2-201ENST00000442517 295 ntBASIC0.8□□□□□ -2.28
CKS2P33552 MTND5P8-201ENST00000449817 1083 ntBASIC0.8□□□□□ -2.28
CKS2P33552 RPS26P55-201ENST00000471178 356 ntBASIC0.8□□□□□ -2.28
CKS2P33552 RPL7P43-201ENST00000478876 753 ntBASIC0.8□□□□□ -2.28
CKS2P33552 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.8□□□□□ -2.28
CKS2P33552 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.8□□□□□ -2.28
CKS2P33552 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.8□□□□□ -2.28
CKS2P33552 AP000763.2-201ENST00000540641 163 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms