Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FAM92A1P2-202ENST00000504766 877 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 AC074250.1-201ENST00000511117 192 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 MRPS36P2-201ENST00000512569 299 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.06□□□□□ -1.92
ABCD3P28288 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
ABCD3P28288 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ABCD3P28288 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.06□□□□□ -1.92
ABCD3P28288 AC093536.2-201ENST00000565257 1406 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 TPRKBP2-201ENST00000565969 475 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 AC092325.1-201ENST00000566449 554 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.06□□□□□ -1.92
ABCD3P28288 AC010620.2-201ENST00000600135 313 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.06□□□□□ -1.92
ABCD3P28288 AL162413.1-201ENST00000603198 110 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 AF250324.2-201ENST00000608299 610 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 AC022418.1-201ENST00000624118 445 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 SCARNA4-202ENST00000625402 129 ntBASIC3.06□□□□□ -1.92
ABCD3P28288 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.06□□□□□ -1.92
ABCD3P28288 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ABCD3P28288 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ABCD3P28288 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ABCD3P28288 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 AC138915.1-201ENST00000565427 1685 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
ABCD3P28288 RNA5SP267-201ENST00000364893 126 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 RNU6-1280P-201ENST00000365211 107 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 Y_RNA.372-201ENST00000365599 102 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ABCD3P28288 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
ABCD3P28288 SNORD21-201ENST00000383953 95 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 Y_RNA.399-201ENST00000383955 105 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 Y_RNA.480-201ENST00000384364 102 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 RNVU1-14-201ENST00000384770 164 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 SNORD70.1-201ENST00000391007 85 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 RAP1BP3-201ENST00000407180 549 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 U3.37-201ENST00000408528 213 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCD3P28288 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.05□□□□□ -1.92
ABCD3P28288 PTGES3P4-201ENST00000426243 356 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCD3P28288 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.05□□□□□ -1.92
ABCD3P28288 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.05□□□□□ -1.92
ABCD3P28288 SEPT14P3-201ENST00000439401 183 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 ATP5C1P1-201ENST00000441945 895 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AL732372.2-207ENST00000445840 183 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.05□□□□□ -1.92
ABCD3P28288 SEPT14P2-201ENST00000453405 183 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AC006026.2-201ENST00000457376 180 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 RNU7-180P-201ENST00000459240 63 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 SEPT14P4-201ENST00000513445 186 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 MIR2276-201ENST00000516886 89 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 RNU6-835P-201ENST00000516974 104 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCD3P28288 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCD3P28288 FO082796.1-201ENST00000523795 183 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 MTND4P7-201ENST00000523876 130 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCD3P28288 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.05□□□□□ -1.92
ABCD3P28288 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCD3P28288 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.05□□□□□ -1.92
ABCD3P28288 AC011471.1-201ENST00000585766 187 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 AC025165.5-201ENST00000602802 578 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AC012119.1-201ENST00000603184 222 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 SRGNP1-201ENST00000603392 451 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 AL162713.1-201ENST00000604480 262 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 uc_338.34-201ENST00000617467 174 ntBASIC3.05□□□□□ -1.92
ABCD3P28288 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.05□□□□□ -1.92
ABCD3P28288 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ABCD3P28288 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.05□□□□□ -1.92
ABCD3P28288 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ABCD3P28288 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ABCD3P28288 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
ABCD3P28288 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
ABCD3P28288 Y_RNA.9-201ENST00000362354 101 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 RNU6-19P-201ENST00000384718 107 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 SNORD37.1-201ENST00000390968 65 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AL592114.1-201ENST00000403842 483 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 RNA5SP44-201ENST00000410446 133 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.04□□□□□ -1.92
ABCD3P28288 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.04□□□□□ -1.92
ABCD3P28288 AL441985.1-201ENST00000457727 251 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 MTAPP1-201ENST00000489154 819 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.04□□□□□ -1.92
ABCD3P28288 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.04□□□□□ -1.92
ABCD3P28288 MTCO3P9-201ENST00000506989 781 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 AC116655.1-201ENST00000508324 901 ntBASIC3.04□□□□□ -1.92
ABCD3P28288 MTND3P25-201ENST00000509243 135 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms