Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.08□□□□□ -1.6
VARSP26640 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VARSP26640 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VARSP26640 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VARSP26640 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VARSP26640 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VARSP26640 MAPK10-263ENST00000641052 4307 ntBASIC5.08□□□□□ -1.6
VARSP26640 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VARSP26640 RNU6-834P-201ENST00000362367 110 ntBASIC5.08□□□□□ -1.6
VARSP26640 RNU6-173P-201ENST00000364215 104 ntBASIC5.08□□□□□ -1.6
VARSP26640 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.08□□□□□ -1.6
VARSP26640 RPS12P23-201ENST00000419579 400 ntBASIC5.08□□□□□ -1.6
VARSP26640 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.08□□□□□ -1.6
VARSP26640 AL389915.2-201ENST00000454576 441 ntBASIC5.08□□□□□ -1.6
VARSP26640 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.08□□□□□ -1.6
VARSP26640 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VARSP26640 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.08□□□□□ -1.6
VARSP26640 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.08□□□□□ -1.6
VARSP26640 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VARSP26640 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.08□□□□□ -1.6
VARSP26640 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.08□□□□□ -1.6
VARSP26640 AL592182.3-201ENST00000642132 3304 ntBASIC5.08□□□□□ -1.6
VARSP26640 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VARSP26640 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.08□□□□□ -1.6
VARSP26640 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
VARSP26640 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.07□□□□□ -1.6
VARSP26640 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.07□□□□□ -1.6
VARSP26640 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
VARSP26640 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VARSP26640 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARSP26640 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VARSP26640 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.07□□□□□ -1.6
VARSP26640 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.07□□□□□ -1.6
VARSP26640 Y_RNA.542-201ENST00000384641 111 ntBASIC5.07□□□□□ -1.6
VARSP26640 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VARSP26640 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VARSP26640 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.07□□□□□ -1.6
VARSP26640 EBAG9P1-201ENST00000418955 543 ntBASIC5.07□□□□□ -1.6
VARSP26640 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.07□□□□□ -1.6
VARSP26640 AC108075.1-201ENST00000424692 529 ntBASIC5.07□□□□□ -1.6
VARSP26640 AC243964.1-201ENST00000441814 261 ntBASIC5.07□□□□□ -1.6
VARSP26640 AC010095.1-201ENST00000443543 144 ntBASIC5.07□□□□□ -1.6
VARSP26640 AL591473.1-201ENST00000464297 313 ntBASIC5.07□□□□□ -1.6
VARSP26640 RPS29P22-201ENST00000472363 168 ntBASIC5.07□□□□□ -1.6
VARSP26640 SCARNA15.2-201ENST00000516409 127 ntBASIC5.07□□□□□ -1.6
VARSP26640 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.07□□□□□ -1.6
VARSP26640 AC107016.1-201ENST00000550463 337 ntBASIC5.07□□□□□ -1.6
VARSP26640 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.07□□□□□ -1.6
VARSP26640 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARSP26640 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VARSP26640 SMG1P4-204ENST00000523028 4131 ntBASIC5.07□□□□□ -1.6
VARSP26640 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARSP26640 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.07□□□□□ -1.6
VARSP26640 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARSP26640 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VARSP26640 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VARSP26640 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VARSP26640 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.06□□□□□ -1.6
VARSP26640 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VARSP26640 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.06□□□□□ -1.6
VARSP26640 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VARSP26640 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARSP26640 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VARSP26640 RPL23P2-201ENST00000320371 421 ntBASIC5.06□□□□□ -1.6
VARSP26640 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARSP26640 DEFB108F-201ENST00000344638 222 ntBASIC5.06□□□□□ -1.6
VARSP26640 RNU6-137P-201ENST00000363680 108 ntBASIC5.06□□□□□ -1.6
VARSP26640 RNU6-142P-201ENST00000384019 107 ntBASIC5.06□□□□□ -1.6
VARSP26640 RN7SKP16-201ENST00000410180 299 ntBASIC5.06□□□□□ -1.6
VARSP26640 Y_RNA.595-201ENST00000410403 105 ntBASIC5.06□□□□□ -1.6
VARSP26640 AC138623.1-201ENST00000418060 216 ntBASIC5.06□□□□□ -1.6
VARSP26640 AC098614.2-201ENST00000426040 255 ntBASIC5.06□□□□□ -1.6
VARSP26640 PTGES3P4-201ENST00000426243 356 ntBASIC5.06□□□□□ -1.6
VARSP26640 TDGF1P1-201ENST00000445734 527 ntBASIC5.06□□□□□ -1.6
VARSP26640 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.06□□□□□ -1.6
VARSP26640 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.06□□□□□ -1.6
VARSP26640 AC008953.1-201ENST00000497334 318 ntBASIC5.06□□□□□ -1.6
VARSP26640 SNORA43.2-201ENST00000516652 128 ntBASIC5.06□□□□□ -1.6
VARSP26640 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.06□□□□□ -1.6
VARSP26640 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.06□□□□□ -1.6
VARSP26640 AC022616.8-201ENST00000533569 253 ntBASIC5.06□□□□□ -1.6
VARSP26640 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.06□□□□□ -1.6
VARSP26640 DNAJC19P2-201ENST00000593340 302 ntBASIC5.06□□□□□ -1.6
VARSP26640 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.06□□□□□ -1.6
VARSP26640 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.06□□□□□ -1.6
VARSP26640 AL138963.2-201ENST00000605137 226 ntBASIC5.06□□□□□ -1.6
VARSP26640 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.6
VARSP26640 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.06□□□□□ -1.6
VARSP26640 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VARSP26640 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARSP26640 AL136964.1-201ENST00000622038 2990 ntBASIC5.06□□□□□ -1.6
VARSP26640 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARSP26640 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VARSP26640 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 AL365440.1-201ENST00000436135 2167 ntBASIC5.05□□□□□ -1.6
VARSP26640 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 CUL1P1-201ENST00000509510 2425 ntBASIC5.05□□□□□ -1.6
VARSP26640 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VARSP26640 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms