Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RN7SL41P-201ENST00000476144 297 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC090525.1-201ENST00000479116 478 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC090543.2-201ENST00000483963 348 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC004057.1-201ENST00000485827 348 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.09□□□□□ -1.75
VAMP1P23763 RNA5SP112-201ENST00000515937 99 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 RNU6-475P-201ENST00000516073 104 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 RNU4-77P-201ENST00000516692 156 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 Y_RNA.719-201ENST00000517156 106 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 Y_RNA.720-201ENST00000517166 92 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.09□□□□□ -1.75
VAMP1P23763 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VAMP1P23763 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP1P23763 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.09□□□□□ -1.75
VAMP1P23763 MIR4680-201ENST00000580906 66 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.09□□□□□ -1.75
VAMP1P23763 AL162713.1-201ENST00000604480 262 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AL162730.1-201ENST00000605734 292 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 RPL23AP88-201ENST00000605759 454 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 RPSAP73-201ENST00000614820 330 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC140113.4-201ENST00000622087 222 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC091905.2-201ENST00000623143 306 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 AC091903.1-201ENST00000624322 454 ntBASIC4.09□□□□□ -1.75
VAMP1P23763 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.09□□□□□ -1.75
VAMP1P23763 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAMP1P23763 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAMP1P23763 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAMP1P23763 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VAMP1P23763 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VAMP1P23763 AC091564.4-201ENST00000533934 2194 ntBASIC4.09□□□□□ -1.76
VAMP1P23763 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VAMP1P23763 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP1P23763 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.08□□□□□ -1.76
VAMP1P23763 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP1P23763 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAMP1P23763 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAMP1P23763 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAMP1P23763 RNU6-655P-201ENST00000362858 107 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 SNORA63C-201ENST00000364578 129 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 SNORD14.1-201ENST00000365609 90 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 Y_RNA.485-201ENST00000384395 102 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 RNU1-57P-201ENST00000384491 166 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 RNA5SP372-201ENST00000390836 115 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 U3.26-201ENST00000391236 204 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 MIR1182-201ENST00000408363 97 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC113618.1-201ENST00000416747 285 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC097463.2-201ENST00000421074 142 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAMP1P23763 AC091812.1-201ENST00000432235 1948 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 RPS17P8-201ENST00000434525 335 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 Z75746.1-201ENST00000440243 2080 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 MTCO3P8-201ENST00000453691 755 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP1P23763 RNU6-764P-201ENST00000516396 105 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC109329.1-201ENST00000518744 317 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.08□□□□□ -1.76
VAMP1P23763 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.08□□□□□ -1.76
VAMP1P23763 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP1P23763 AC103988.1-201ENST00000566382 2177 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.08□□□□□ -1.76
VAMP1P23763 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.08□□□□□ -1.76
VAMP1P23763 AC244505.7-201ENST00000599675 272 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC006557.5-201ENST00000603126 811 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC016727.2-201ENST00000603988 621 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC116312.1-201ENST00000606841 314 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC019206.1-201ENST00000621938 425 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.08□□□□□ -1.76
VAMP1P23763 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.08□□□□□ -1.76
VAMP1P23763 SNORA43.4-201ENST00000629559 138 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 MIR4272-201ENST00000635924 64 ntBASIC4.08□□□□□ -1.76
VAMP1P23763 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VAMP1P23763 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VAMP1P23763 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VAMP1P23763 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.07□□□□□ -1.76
VAMP1P23763 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.07□□□□□ -1.76
VAMP1P23763 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VAMP1P23763 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.07□□□□□ -1.76
VAMP1P23763 RNA5SP339-201ENST00000390987 122 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 SNORA11.5-201ENST00000408163 128 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 USP9YP16-201ENST00000430287 407 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
VAMP1P23763 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP1P23763 RPL12P11-201ENST00000439970 501 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.07□□□□□ -1.76
VAMP1P23763 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP1P23763 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.07□□□□□ -1.76
VAMP1P23763 USP9YP23-201ENST00000455085 407 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP1P23763 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 RPL7P51-201ENST00000490532 749 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 RNU6-1198P-201ENST00000516904 67 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP1P23763 AC008739.2-201ENST00000597006 317 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.07□□□□□ -1.76
VAMP1P23763 AC124312.5-201ENST00000604451 268 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 MIR6806-201ENST00000622141 64 ntBASIC4.07□□□□□ -1.76
VAMP1P23763 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.07□□□□□ -1.76
VAMP1P23763 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.07□□□□□ -1.76
VAMP1P23763 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VAMP1P23763 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms