Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
TNFSF4P23510 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF4P23510 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF4P23510 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
TNFSF4P23510 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFSF4P23510 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF4P23510 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF4P23510 RNU6-78P-201ENST00000362897 107 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 RNU6-254P-201ENST00000363377 107 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 RNA5SP479-201ENST00000364858 117 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 RNU6-128P-201ENST00000383976 107 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TNFSF4P23510 SNORD56-201ENST00000413522 71 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AC138393.2-201ENST00000414742 246 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF4P23510 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF4P23510 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF4P23510 RPL21P111-201ENST00000418453 477 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AL353678.1-201ENST00000422735 741 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AL139247.1-201ENST00000422768 325 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF4P23510 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFSF4P23510 AL359672.1-201ENST00000442302 409 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF4P23510 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF4P23510 AC107626.1-201ENST00000471084 183 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 RPL23AP45-201ENST00000476406 468 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFSF4P23510 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 RPL31P61-201ENST00000496160 376 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 GZMAP1-201ENST00000503054 631 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 MTCO2P30-201ENST00000503662 364 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF4P23510 CR383656.8-201ENST00000549046 145 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF4P23510 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AC009163.5-201ENST00000575421 637 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 MIR5685-201ENST00000579080 79 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFSF4P23510 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF4P23510 AL354798.1-201ENST00000622505 329 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 MIR3529-201ENST00000637713 78 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFSF4P23510 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFSF4P23510 AC092435.3-201ENST00000565538 3654 ntBASIC3.3□□□□□ -1.88
TNFSF4P23510 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFSF4P23510 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TNFSF4P23510 RNU6-858P-201ENST00000362436 107 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 Y_RNA.279-201ENST00000364763 95 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 Y_RNA.390-201ENST00000383932 102 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 SNORA32.2-201ENST00000384049 122 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 RNU6-213P-201ENST00000384051 104 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 RNU6-1013P-201ENST00000384180 107 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 MIR147B-201ENST00000390185 80 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 RNU6-1106P-201ENST00000390845 107 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 RPL32P23-201ENST00000397237 405 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFSF4P23510 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFSF4P23510 RPL7P12-201ENST00000446719 750 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.29□□□□□ -1.88
TNFSF4P23510 AC012308.1-201ENST00000451232 178 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 MED28P2-201ENST00000475771 317 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFSF4P23510 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFSF4P23510 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFSF4P23510 SNORA20.3-201ENST00000516880 132 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFSF4P23510 AC087241.2-201ENST00000535801 324 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 YPEL5P3-201ENST00000547227 352 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFSF4P23510 AC008739.2-201ENST00000597006 317 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AL670379.10-201ENST00000604330 253 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AL670379.9-201ENST00000605428 253 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFSF4P23510 AC009248.2-201ENST00000619826 254 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 U4.7-201ENST00000638126 106 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFSF4P23510 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFSF4P23510 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFSF4P23510 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFSF4P23510 HAUS6P2-201ENST00000433254 2404 ntBASIC3.29□□□□□ -1.88
TNFSF4P23510 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFSF4P23510 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFSF4P23510 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TNFSF4P23510 MTND5P1-201ENST00000445440 1375 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
TNFSF4P23510 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFSF4P23510 AC138393.1-203ENST00000327086 343 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 Y_RNA.88-201ENST00000363029 99 ntBASIC3.28□□□□□ -1.88
TNFSF4P23510 RNU6-214P-201ENST00000384130 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms