Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL049873.1-201ENST00000480540 376 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC096576.1-201ENST00000489014 359 ntBASIC2.82□□□□□ -1.96
CDH3P22223 RPL39P36-201ENST00000490784 156 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC079382.1-201ENST00000493346 557 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.82□□□□□ -1.96
CDH3P22223 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDH3P22223 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.82□□□□□ -1.96
CDH3P22223 Y_RNA.689-201ENST00000516589 107 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC016957.1-201ENST00000534895 309 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AL359212.1-201ENST00000556608 614 ntBASIC2.82□□□□□ -1.96
CDH3P22223 HMGB1P6-201ENST00000569046 646 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC107294.1-201ENST00000609524 467 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC025034.2-201ENST00000623264 286 ntBASIC2.82□□□□□ -1.96
CDH3P22223 SCARNA15.3-201ENST00000626315 122 ntBASIC2.82□□□□□ -1.96
CDH3P22223 SCARNA4.1-201ENST00000628597 123 ntBASIC2.82□□□□□ -1.96
CDH3P22223 MIR6863-201ENST00000636112 90 ntBASIC2.82□□□□□ -1.96
CDH3P22223 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDH3P22223 MTND5P17-201ENST00000418405 1603 ntBASIC2.82□□□□□ -1.96
CDH3P22223 AC135776.4-201ENST00000624300 1904 ntBASIC2.81□□□□□ -1.96
CDH3P22223 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH3P22223 AC022336.2-201ENST00000568966 2538 ntBASIC2.81□□□□□ -1.96
CDH3P22223 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDH3P22223 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH3P22223 RNU6-179P-201ENST00000363350 107 ntBASIC2.81□□□□□ -1.96
CDH3P22223 SNORA62.1-201ENST00000364287 154 ntBASIC2.81□□□□□ -1.96
CDH3P22223 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDH3P22223 RNA5SP354-201ENST00000391247 136 ntBASIC2.81□□□□□ -1.96
CDH3P22223 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.81□□□□□ -1.96
CDH3P22223 UBE2V1P10-201ENST00000414685 269 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.81□□□□□ -1.96
CDH3P22223 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH3P22223 ZNF863P-201ENST00000426746 417 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH3P22223 AL592045.1-201ENST00000429867 352 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AL139132.1-201ENST00000431587 344 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.81□□□□□ -1.96
CDH3P22223 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH3P22223 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH3P22223 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.81□□□□□ -1.96
CDH3P22223 AC022364.2-201ENST00000457963 554 ntBASIC2.81□□□□□ -1.96
CDH3P22223 SUMO2P6-201ENST00000505273 288 ntBASIC2.81□□□□□ -1.96
CDH3P22223 RNU6-123P-201ENST00000516163 102 ntBASIC2.81□□□□□ -1.96
CDH3P22223 RNU1-103P-201ENST00000516502 125 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.81□□□□□ -1.96
CDH3P22223 OR4R1P-201ENST00000529879 463 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AC004486.1-201ENST00000546846 233 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AC068790.6-201ENST00000602558 258 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AC012409.4-201ENST00000612923 249 ntBASIC2.81□□□□□ -1.96
CDH3P22223 AC068792.1-201ENST00000621354 417 ntBASIC2.81□□□□□ -1.96
CDH3P22223 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH3P22223 ZNF680P1-201ENST00000436625 1469 ntBASIC2.81□□□□□ -1.96
CDH3P22223 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDH3P22223 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
CDH3P22223 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CDH3P22223 AC103710.2-202ENST00000641454 2853 ntBASIC2.8□□□□□ -1.96
CDH3P22223 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDH3P22223 RNU6-1120P-201ENST00000362988 108 ntBASIC2.8□□□□□ -1.96
CDH3P22223 SNORA80A-201ENST00000363922 136 ntBASIC2.8□□□□□ -1.96
CDH3P22223 RNU4-48P-201ENST00000365559 182 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CDH3P22223 Y_RNA.505-201ENST00000384489 102 ntBASIC2.8□□□□□ -1.96
CDH3P22223 MTCO3P40-201ENST00000392516 676 ntBASIC2.8□□□□□ -1.96
CDH3P22223 UBE2V1P2-201ENST00000397758 440 ntBASIC2.8□□□□□ -1.96
CDH3P22223 CALM2P3-201ENST00000400429 449 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
CDH3P22223 FABP5P13-201ENST00000452144 328 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
CDH3P22223 RPL12P25-201ENST00000455592 494 ntBASIC2.8□□□□□ -1.96
CDH3P22223 RBBP4P6-201ENST00000508098 202 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC098591.2-201ENST00000510152 315 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.8□□□□□ -1.96
CDH3P22223 SCARNA13-201ENST00000516672 275 ntBASIC2.8□□□□□ -1.96
CDH3P22223 RNU6-914P-201ENST00000516749 109 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH3P22223 OR5AL2P-201ENST00000532185 920 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH3P22223 AC068135.2-201ENST00000569293 1028 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC103810.1-201ENST00000579873 453 ntBASIC2.8□□□□□ -1.96
CDH3P22223 MIR4775-201ENST00000581168 75 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC008521.1-201ENST00000587471 187 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.8□□□□□ -1.96
CDH3P22223 AC004805.2-201ENST00000605382 482 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AL021997.1-201ENST00000605757 193 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC092954.2-201ENST00000609103 430 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC017083.3-201ENST00000609955 700 ntBASIC2.8□□□□□ -1.96
CDH3P22223 FTX_3.1-201ENST00000610451 147 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC013562.2-201ENST00000611632 603 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC122108.2-201ENST00000611946 526 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AP001486.3-201ENST00000615334 372 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AC073534.2-201ENST00000620377 381 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AL359880.1-201ENST00000621879 266 ntBASIC2.8□□□□□ -1.96
CDH3P22223 AL157786.1-207ENST00000627771 695 ntBASIC2.8□□□□□ -1.96
CDH3P22223 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.8□□□□□ -1.96
CDH3P22223 Z99571.1-201ENST00000636677 394 ntBASIC2.8□□□□□ -1.96
CDH3P22223 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH3P22223 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDH3P22223 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
CDH3P22223 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.79□□□□□ -1.96
CDH3P22223 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms