Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC010329.5-201ENST00000623497 2174 ntBASIC2.34□□□□□ -2.04
XRCC1P18887 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
XRCC1P18887 MTND4P35-201ENST00000604257 1375 ntBASIC2.34□□□□□ -2.04
XRCC1P18887 TEX21P-201ENST00000447107 1476 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC069528.2-201ENST00000624849 1991 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 SNORD56.2-201ENST00000363242 71 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 RNU6-288P-201ENST00000363690 104 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 RNU6-188P-201ENST00000364207 107 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 RNU4-53P-201ENST00000410828 140 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.33□□□□□ -2.04
XRCC1P18887 USP9YP6-201ENST00000413550 854 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 AL589872.1-201ENST00000426602 288 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AL592045.1-201ENST00000429867 352 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 AL591212.2-201ENST00000433923 257 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC107626.1-201ENST00000471084 183 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC008413.1-201ENST00000511864 177 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 RNU5F-8P-201ENST00000515941 111 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.33□□□□□ -2.04
XRCC1P18887 MIR3915-201ENST00000578518 97 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AC024619.4-201ENST00000580924 316 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 MIR3945-201ENST00000581853 98 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC012065.4-201ENST00000602445 679 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AL391813.1-201ENST00000603098 260 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.33□□□□□ -2.04
XRCC1P18887 AC013412.1-201ENST00000610687 192 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 MIR7515-201ENST00000637837 67 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
XRCC1P18887 ADAM3A-203ENST00000461344 2157 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 AC080100.1-201ENST00000624239 5356 ntBASIC2.33□□□□□ -2.04
XRCC1P18887 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
XRCC1P18887 RNU4-1-201ENST00000363925 141 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 SET-203ENST00000372688 801 ntTSL 2 BASIC2.32□□□□□ -2.04
XRCC1P18887 RNU6-946P-201ENST00000383878 107 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 RNU6-1083P-201ENST00000384022 107 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 RNU6-658P-201ENST00000384606 106 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 MIR144-201ENST00000384886 86 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.32□□□□□ -2.04
XRCC1P18887 RPL23AP32-201ENST00000395315 459 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 TAF9P1-201ENST00000445421 515 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.32□□□□□ -2.04
XRCC1P18887 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.32□□□□□ -2.04
XRCC1P18887 TAF9P2-201ENST00000454958 515 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.32□□□□□ -2.04
XRCC1P18887 AC093899.1-201ENST00000457984 376 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 RPL23AP70-201ENST00000483361 460 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AC007182.2-201ENST00000489251 402 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AC139453.3-201ENST00000493276 369 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
XRCC1P18887 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.32□□□□□ -2.04
XRCC1P18887 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.32□□□□□ -2.04
XRCC1P18887 AC084851.1-201ENST00000529105 249 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 DUXAP5-201ENST00000529668 529 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AP003122.4-201ENST00000530980 758 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.32□□□□□ -2.04
XRCC1P18887 AC009063.1-201ENST00000563342 702 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.32□□□□□ -2.04
XRCC1P18887 MIR3682-201ENST00000581338 84 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 MIR4298-201ENST00000584380 73 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 OR1M4P-201ENST00000589199 287 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 HMGN1P30-201ENST00000589286 268 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AC022893.3-201ENST00000607665 437 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.32□□□□□ -2.04
XRCC1P18887 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 AC099654.13-201ENST00000639774 207 ntBASIC2.32□□□□□ -2.04
XRCC1P18887 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
XRCC1P18887 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.32□□□□□ -2.04
XRCC1P18887 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.32□□□□□ -2.04
XRCC1P18887 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
XRCC1P18887 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.31□□□□□ -2.04
XRCC1P18887 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 RNU6-461P-201ENST00000364195 107 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
XRCC1P18887 RNU6-190P-201ENST00000384154 102 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 Y_RNA.534-201ENST00000384599 112 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.31□□□□□ -2.04
XRCC1P18887 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.31□□□□□ -2.04
XRCC1P18887 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.31□□□□□ -2.04
XRCC1P18887 HIGD1AP2-201ENST00000446367 280 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 DPPA3P1-201ENST00000448050 469 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 AC003071.1-201ENST00000451219 789 ntBASIC2.31□□□□□ -2.04
XRCC1P18887 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.31□□□□□ -2.04
XRCC1P18887 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms