Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.53□□□□□ -2.16
ATF1P18846 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.53□□□□□ -2.16
ATF1P18846 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
ATF1P18846 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.53□□□□□ -2.16
ATF1P18846 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.53□□□□□ -2.16
ATF1P18846 AL441985.1-201ENST00000457727 251 ntBASIC1.53□□□□□ -2.16
ATF1P18846 snoU109.1-201ENST00000459339 135 ntBASIC1.53□□□□□ -2.16
ATF1P18846 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.53□□□□□ -2.16
ATF1P18846 BZW1P2-201ENST00000473537 826 ntBASIC1.53□□□□□ -2.16
ATF1P18846 UBE2DNL-203ENST00000474922 222 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AC104629.1-201ENST00000494226 508 ntBASIC1.53□□□□□ -2.16
ATF1P18846 RPS29P11-201ENST00000496507 171 ntBASIC1.53□□□□□ -2.16
ATF1P18846 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ATF1P18846 AC010486.1-201ENST00000511793 424 ntBASIC1.53□□□□□ -2.16
ATF1P18846 SNORA19.3-201ENST00000516165 130 ntBASIC1.53□□□□□ -2.16
ATF1P18846 SNORA48.11-201ENST00000517015 89 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.53□□□□□ -2.16
ATF1P18846 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.53□□□□□ -2.16
ATF1P18846 AP006587.4-201ENST00000526053 529 ntBASIC1.53□□□□□ -2.16
ATF1P18846 OR5AL2P-201ENST00000532185 920 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AC092451.2-201ENST00000538746 658 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ATF1P18846 MIR4648-201ENST00000580107 72 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AC010928.2-201ENST00000588017 287 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AC243960.4-201ENST00000600532 288 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AL078605.1-201ENST00000603529 500 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AC092574.1-201ENST00000609771 420 ntBASIC1.53□□□□□ -2.16
ATF1P18846 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
ATF1P18846 AL773524.1-201ENST00000614065 229 ntBASIC1.53□□□□□ -2.16
ATF1P18846 AL121895.2-201ENST00000619558 447 ntBASIC1.53□□□□□ -2.16
ATF1P18846 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.53□□□□□ -2.16
ATF1P18846 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.53□□□□□ -2.16
ATF1P18846 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.53□□□□□ -2.17
ATF1P18846 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.52□□□□□ -2.17
ATF1P18846 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.52□□□□□ -2.17
ATF1P18846 AC103710.2-202ENST00000641454 2853 ntBASIC1.52□□□□□ -2.17
ATF1P18846 MIR518D-201ENST00000385014 87 ntBASIC1.52□□□□□ -2.17
ATF1P18846 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ATF1P18846 MIR320C1-201ENST00000408566 88 ntBASIC1.52□□□□□ -2.17
ATF1P18846 RPS20P15-201ENST00000412792 311 ntBASIC1.52□□□□□ -2.17
ATF1P18846 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ATF1P18846 AL035407.1-201ENST00000429211 571 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AC003989.2-201ENST00000440224 169 ntBASIC1.52□□□□□ -2.17
ATF1P18846 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.52□□□□□ -2.17
ATF1P18846 AC117503.1-201ENST00000472241 394 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AC023194.1-201ENST00000493084 308 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AC079395.1-201ENST00000510981 262 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.52□□□□□ -2.17
ATF1P18846 AC034114.1-201ENST00000520293 285 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.52□□□□□ -2.17
ATF1P18846 OR5B19P-201ENST00000531766 928 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AC110588.1-201ENST00000559699 137 ntBASIC1.52□□□□□ -2.17
ATF1P18846 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ATF1P18846 AL606834.3-201ENST00000602615 496 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AC005034.5-201ENST00000604219 466 ntBASIC1.52□□□□□ -2.17
ATF1P18846 BNIP3P19-201ENST00000605397 577 ntBASIC1.52□□□□□ -2.17
ATF1P18846 RNU6-1192P-201ENST00000612197 107 ntBASIC1.52□□□□□ -2.17
ATF1P18846 AC087241.4-201ENST00000612441 480 ntBASIC1.52□□□□□ -2.17
ATF1P18846 RNU6-489P-201ENST00000618289 107 ntBASIC1.52□□□□□ -2.17
ATF1P18846 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ATF1P18846 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
ATF1P18846 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ATF1P18846 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ATF1P18846 RNU6-701P-201ENST00000384059 107 ntBASIC1.51□□□□□ -2.17
ATF1P18846 U8.14-201ENST00000390843 143 ntBASIC1.51□□□□□ -2.17
ATF1P18846 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.51□□□□□ -2.17
ATF1P18846 AL158823.1-201ENST00000418441 478 ntBASIC1.51□□□□□ -2.17
ATF1P18846 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.51□□□□□ -2.17
ATF1P18846 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.51□□□□□ -2.17
ATF1P18846 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.51□□□□□ -2.17
ATF1P18846 HMGB1P27-201ENST00000431429 603 ntBASIC1.51□□□□□ -2.17
ATF1P18846 USP9YP24-201ENST00000434374 697 ntBASIC1.51□□□□□ -2.17
ATF1P18846 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.51□□□□□ -2.17
ATF1P18846 USP9YP10-201ENST00000454868 628 ntBASIC1.51□□□□□ -2.17
ATF1P18846 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.51□□□□□ -2.17
ATF1P18846 RPL7P43-201ENST00000478876 753 ntBASIC1.51□□□□□ -2.17
ATF1P18846 AC108729.1-201ENST00000487812 947 ntBASIC1.51□□□□□ -2.17
ATF1P18846 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.51□□□□□ -2.17
ATF1P18846 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.51□□□□□ -2.17
ATF1P18846 RNA5SP182-201ENST00000516064 82 ntBASIC1.51□□□□□ -2.17
ATF1P18846 RNU6-572P-201ENST00000516724 80 ntBASIC1.51□□□□□ -2.17
ATF1P18846 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.51□□□□□ -2.17
ATF1P18846 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.51□□□□□ -2.17
ATF1P18846 AC104581.2-201ENST00000572227 430 ntBASIC1.51□□□□□ -2.17
ATF1P18846 MIR4782-201ENST00000577987 79 ntBASIC1.51□□□□□ -2.17
ATF1P18846 BNIP3P27-201ENST00000599991 412 ntBASIC1.51□□□□□ -2.17
ATF1P18846 AC092953.2-201ENST00000608000 699 ntBASIC1.51□□□□□ -2.17
ATF1P18846 AC090970.3-201ENST00000612566 866 ntBASIC1.51□□□□□ -2.17
ATF1P18846 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.51□□□□□ -2.17
ATF1P18846 AC107308.1-201ENST00000615897 301 ntBASIC1.51□□□□□ -2.17
ATF1P18846 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.51□□□□□ -2.17
ATF1P18846 AC008555.8-201ENST00000623602 2168 ntBASIC1.51□□□□□ -2.17
ATF1P18846 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.5□□□□□ -2.17
ATF1P18846 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
ATF1P18846 U8.2-201ENST00000363156 134 ntBASIC1.5□□□□□ -2.17
ATF1P18846 SNORD116-12-201ENST00000384468 92 ntBASIC1.5□□□□□ -2.17
ATF1P18846 MIR9-3-201ENST00000385084 90 ntBASIC1.5□□□□□ -2.17
ATF1P18846 MIR561-201ENST00000385216 97 ntBASIC1.5□□□□□ -2.17
ATF1P18846 MIR1302-8-201ENST00000408342 128 ntBASIC1.5□□□□□ -2.17
ATF1P18846 MIR1294-201ENST00000408503 142 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms