Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.76□□□□□ -1.97
PDGFRAP16234 AC005261.5-201ENST00000596280 355 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AC073544.2-201ENST00000601155 540 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AL139286.2-201ENST00000606838 396 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AC012409.4-201ENST00000612923 249 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 SCARNA17.4-201ENST00000614296 143 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 Z69908.1-201ENST00000622603 247 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 MIR6733-201ENST00000635723 61 ntBASIC2.76□□□□□ -1.97
PDGFRAP16234 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDGFRAP16234 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PDGFRAP16234 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.75□□□□□ -1.97
PDGFRAP16234 ELL2P3-201ENST00000457883 1602 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.75□□□□□ -1.97
PDGFRAP16234 Y_RNA.33-201ENST00000362591 102 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 Z98749.2-208ENST00000381646 500 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 RNU6-641P-201ENST00000384006 107 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 MIR196B-201ENST00000384852 84 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 SNORA40C-201ENST00000391285 128 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 RNU6-1025P-201ENST00000410629 104 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFRAP16234 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFRAP16234 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.75□□□□□ -1.97
PDGFRAP16234 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 DPPA3P1-201ENST00000448050 469 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.75□□□□□ -1.97
PDGFRAP16234 AC126389.1-201ENST00000477436 290 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFRAP16234 Y_RNA.695-201ENST00000516715 107 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PDGFRAP16234 COX6CP5-201ENST00000527162 228 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AP000889.1-201ENST00000530968 660 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDGFRAP16234 ADI1P3-201ENST00000549509 470 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFRAP16234 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.75□□□□□ -1.97
PDGFRAP16234 AC009163.5-201ENST00000575421 637 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AC090616.3-201ENST00000582184 217 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 MIR4672-201ENST00000583126 81 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 OR1M4P-201ENST00000589199 287 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AL022154.1-201ENST00000604698 785 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AC064872.1-201ENST00000604823 1072 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 AC087752.4-201ENST00000605911 462 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 MIR7515-201ENST00000637837 67 ntBASIC2.75□□□□□ -1.97
PDGFRAP16234 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDGFRAP16234 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PDGFRAP16234 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDGFRAP16234 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDGFRAP16234 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDGFRAP16234 RNU6-395P-201ENST00000365662 106 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 UBE2V1P2-201ENST00000397758 440 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 OR51A5P-201ENST00000415429 942 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 RPLP0P7-201ENST00000416050 667 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 USP9YP20-201ENST00000419224 558 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFRAP16234 MYL8P-204ENST00000431574 518 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC236972.1-201ENST00000433225 199 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFRAP16234 AL161651.1-201ENST00000440882 223 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC011816.1-201ENST00000441346 546 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFRAP16234 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFRAP16234 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFRAP16234 RNU6-826P-201ENST00000516827 104 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 SNORA31.19-201ENST00000517079 126 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.74□□□□□ -1.97
PDGFRAP16234 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.74□□□□□ -1.97
PDGFRAP16234 ELOCP31-201ENST00000540463 467 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFRAP16234 LINC00933-203ENST00000559812 219 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFRAP16234 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
PDGFRAP16234 AC110760.3-201ENST00000598794 467 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC245014.2-201ENST00000603689 287 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC091152.3-201ENST00000604227 325 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC246785.4-201ENST00000605374 287 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 MIR6134-201ENST00000617606 109 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 AC138649.3-201ENST00000622154 254 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDGFRAP16234 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
PDGFRAP16234 CDC27P3-201ENST00000635418 1910 ntBASIC2.74□□□□□ -1.97
PDGFRAP16234 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PDGFRAP16234 RNA5SP393-201ENST00000363423 117 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 RNU6-61P-201ENST00000365528 109 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PDGFRAP16234 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFRAP16234 AC244505.5-201ENST00000443639 207 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 AC079781.2-201ENST00000446424 169 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 CACYBPP2-201ENST00000453625 678 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.73□□□□□ -1.97
PDGFRAP16234 AC008571.1-201ENST00000467232 300 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.73□□□□□ -1.97
PDGFRAP16234 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.73□□□□□ -1.97
PDGFRAP16234 AC096725.1-201ENST00000514266 313 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 SNORA31.18-201ENST00000517043 134 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFRAP16234 AL121821.2-201ENST00000556081 394 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms