Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AP002812.1-201ENST00000495378 474 ntBASIC3.12□□□□□ -1.91
PCNAP12004 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 RNU6-56P-201ENST00000516986 93 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AC009902.1-201ENST00000519351 183 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AL137161.1-201ENST00000532231 390 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AC007536.1-201ENST00000533382 349 ntBASIC3.12□□□□□ -1.91
PCNAP12004 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.12□□□□□ -1.91
PCNAP12004 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 AL157871.3-201ENST00000557231 293 ntBASIC3.12□□□□□ -1.91
PCNAP12004 H3F3AP1-201ENST00000559984 334 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.12□□□□□ -1.91
PCNAP12004 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 uc_338.11-201ENST00000619132 160 ntBASIC3.12□□□□□ -1.91
PCNAP12004 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
PCNAP12004 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 AC099654.7-201ENST00000635788 2127 ntBASIC3.12□□□□□ -1.91
PCNAP12004 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PCNAP12004 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCNAP12004 MTND4P14-201ENST00000435799 1354 ntBASIC3.12□□□□□ -1.91
PCNAP12004 MTND4P35-201ENST00000604257 1375 ntBASIC3.12□□□□□ -1.91
PCNAP12004 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PCNAP12004 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCNAP12004 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCNAP12004 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RNU6-371P-201ENST00000364283 108 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RNU6-1303P-201ENST00000364841 107 ntBASIC3.11□□□□□ -1.91
PCNAP12004 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCNAP12004 RNU6-1035P-201ENST00000384477 107 ntBASIC3.11□□□□□ -1.91
PCNAP12004 MIR449B-201ENST00000384995 97 ntBASIC3.11□□□□□ -1.91
PCNAP12004 SNORA16.2-201ENST00000390991 127 ntBASIC3.11□□□□□ -1.91
PCNAP12004 SNORD70.1-201ENST00000391007 85 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RNA5SP252-201ENST00000391131 119 ntBASIC3.11□□□□□ -1.91
PCNAP12004 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PCNAP12004 RPS4XP7-201ENST00000406274 780 ntBASIC3.11□□□□□ -1.91
PCNAP12004 MIR1289-1-201ENST00000408836 144 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RNU2-68P-201ENST00000410878 191 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RN7SKP58-201ENST00000411010 305 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RNA5SP492-201ENST00000411330 114 ntBASIC3.11□□□□□ -1.91
PCNAP12004 SAR1AP4-201ENST00000429225 591 ntBASIC3.11□□□□□ -1.91
PCNAP12004 snoU13.28-201ENST00000459235 104 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AC008155.2-201ENST00000464337 397 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RPL21P99-201ENST00000480369 423 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
PCNAP12004 RPS29P20-201ENST00000489592 171 ntBASIC3.11□□□□□ -1.91
PCNAP12004 MTCYBP18-201ENST00000501056 747 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.11□□□□□ -1.91
PCNAP12004 SNORD60.2-201ENST00000516883 86 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.11□□□□□ -1.91
PCNAP12004 AP000867.2-201ENST00000532468 320 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.11□□□□□ -1.91
PCNAP12004 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.11□□□□□ -1.91
PCNAP12004 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.11□□□□□ -1.91
PCNAP12004 MIR3609-201ENST00000582661 80 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.11□□□□□ -1.91
PCNAP12004 AC073539.2-201ENST00000597113 165 ntBASIC3.11□□□□□ -1.91
PCNAP12004 MTND4LP5-201ENST00000605152 292 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AL627309.6-201ENST00000606857 840 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AL138880.2-201ENST00000616214 239 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AP003400.5-201ENST00000624827 617 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.11□□□□□ -1.91
PCNAP12004 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
PCNAP12004 AC233263.6-201ENST00000631132 1963 ntBASIC3.11□□□□□ -1.91
PCNAP12004 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCNAP12004 RNU6-884P-201ENST00000363889 107 ntBASIC3.1□□□□□ -1.91
PCNAP12004 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
PCNAP12004 MIR301A-201ENST00000385261 86 ntBASIC3.1□□□□□ -1.91
PCNAP12004 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCNAP12004 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.1□□□□□ -1.91
PCNAP12004 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNAP12004 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.1□□□□□ -1.91
PCNAP12004 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
PCNAP12004 SNRPEP10-201ENST00000420249 274 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AL159987.2-201ENST00000432754 307 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AL121601.2-201ENST00000438019 707 ntBASIC3.1□□□□□ -1.91
PCNAP12004 RPL23AP58-201ENST00000440453 469 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNAP12004 AC010099.1-201ENST00000455434 375 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AL590639.1-201ENST00000456484 337 ntBASIC3.1□□□□□ -1.91
PCNAP12004 FTH1P2-201ENST00000466086 412 ntBASIC3.1□□□□□ -1.91
PCNAP12004 RPL21P93-201ENST00000480465 489 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC112206.3-201ENST00000514578 389 ntBASIC3.1□□□□□ -1.91
PCNAP12004 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC025755.1-201ENST00000521306 278 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.1□□□□□ -1.91
PCNAP12004 MIR1273C-201ENST00000578669 77 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.1□□□□□ -1.91
PCNAP12004 MIR548AC-201ENST00000585049 88 ntBASIC3.1□□□□□ -1.91
PCNAP12004 RPL23AP78-201ENST00000599928 470 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC007938.3-201ENST00000604965 623 ntBASIC3.1□□□□□ -1.91
PCNAP12004 AC073657.2-201ENST00000605661 303 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms