Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBCP0CG48 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBCP0CG48 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
UBCP0CG48 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.82□□□□□ -2.12
UBCP0CG48 RNY4P24-201ENST00000362735 96 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 SNORA25B-201ENST00000365507 128 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 Y_RNA.534-201ENST00000384599 112 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 SNORA40C-201ENST00000391285 128 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 SNORA11.4-201ENST00000408823 129 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 ELOCP17-201ENST00000414751 326 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.82□□□□□ -2.12
UBCP0CG48 ELOCP9-201ENST00000418624 239 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.82□□□□□ -2.12
UBCP0CG48 AL591704.1-201ENST00000432574 275 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.82□□□□□ -2.12
UBCP0CG48 AL078601.1-201ENST00000444542 271 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AL591719.1-201ENST00000444669 744 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.82□□□□□ -2.12
UBCP0CG48 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.82□□□□□ -2.12
UBCP0CG48 MTND1P3-201ENST00000484956 952 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC114781.4-201ENST00000513707 639 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 SNORA4.4-201ENST00000515921 135 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.82□□□□□ -2.12
UBCP0CG48 OR5AQ1P-201ENST00000527596 927 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UBCP0CG48 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.82□□□□□ -2.12
UBCP0CG48 AC009097.3-201ENST00000563557 1018 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.82□□□□□ -2.12
UBCP0CG48 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
UBCP0CG48 AL031274.2-201ENST00000599419 203 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC107952.2-201ENST00000606048 486 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AL365204.3-201ENST00000612448 685 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AC017037.3-201ENST00000625016 472 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.82□□□□□ -2.12
UBCP0CG48 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBCP0CG48 AC006020.1-201ENST00000420179 1854 ntBASIC1.82□□□□□ -2.12
UBCP0CG48 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBCP0CG48 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBCP0CG48 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AL133475.1-201ENST00000404414 305 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AL355143.1-201ENST00000407101 841 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.81□□□□□ -2.12
UBCP0CG48 AL353689.1-201ENST00000438895 199 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 PTENP1-201ENST00000447117 1215 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AC003071.1-201ENST00000451219 789 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.81□□□□□ -2.12
UBCP0CG48 RPL23AP3-201ENST00000453844 468 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 PMCHL2-203ENST00000457791 237 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
UBCP0CG48 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.81□□□□□ -2.12
UBCP0CG48 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.81□□□□□ -2.12
UBCP0CG48 AL356432.3-201ENST00000568952 465 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AL158050.2-201ENST00000605336 568 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AC096772.1-201ENST00000609146 564 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AC022202.1-201ENST00000613515 211 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 FRG1KP-201ENST00000623592 341 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.81□□□□□ -2.12
UBCP0CG48 AC243829.7-201ENST00000633081 225 ntBASIC1.81□□□□□ -2.12
UBCP0CG48 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBCP0CG48 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UBCP0CG48 ZNF702P-202ENST00000434269 1966 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 RNA5SP289-201ENST00000362332 137 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 RNA5SP88-201ENST00000365560 109 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
UBCP0CG48 RNU6-636P-201ENST00000384598 107 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 SNORA40.19-201ENST00000390846 128 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 FCF1P10-201ENST00000407590 479 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 RNU2-62P-201ENST00000410868 191 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.8□□□□□ -2.12
UBCP0CG48 AC096920.1-201ENST00000423991 241 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 DNAJC19P4-201ENST00000440115 345 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.8□□□□□ -2.12
UBCP0CG48 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
UBCP0CG48 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
UBCP0CG48 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.8□□□□□ -2.12
UBCP0CG48 MTATP6P14-201ENST00000455189 673 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.8□□□□□ -2.12
UBCP0CG48 RPS3AP22-201ENST00000488297 769 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AC018868.1-201ENST00000491307 315 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 FAM92A1P2-202ENST00000504766 877 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.8□□□□□ -2.12
UBCP0CG48 RNU6-1315P-201ENST00000517187 99 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AC034114.1-201ENST00000520293 285 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AC026464.5-201ENST00000562497 722 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AC005034.5-201ENST00000604219 466 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 AP000484.1-201ENST00000620067 1252 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.8□□□□□ -2.12
UBCP0CG48 MIR6873-201ENST00000622788 63 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UBCP0CG48 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.8□□□□□ -2.12
UBCP0CG48 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBCP0CG48 U3.13-201ENST00000364804 214 ntBASIC1.79□□□□□ -2.12
UBCP0CG48 SMIM11P1-201ENST00000369586 178 ntBASIC1.79□□□□□ -2.12
UBCP0CG48 RNU6-166P-201ENST00000384371 107 ntBASIC1.79□□□□□ -2.12
UBCP0CG48 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
UBCP0CG48 GSTA9P-201ENST00000406231 611 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms