Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 EIF4EP3-201ENST00000498782 656 ntBASIC2.67□□□□□ -1.98
VIMP08670 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.67□□□□□ -1.98
VIMP08670 RNU6-410P-201ENST00000517006 107 ntBASIC2.67□□□□□ -1.98
VIMP08670 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.67□□□□□ -1.98
VIMP08670 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.67□□□□□ -1.98
VIMP08670 MIR3944-201ENST00000581277 108 ntBASIC2.67□□□□□ -1.98
VIMP08670 MIR3117-201ENST00000584034 78 ntBASIC2.67□□□□□ -1.98
VIMP08670 AC008521.1-201ENST00000587471 187 ntBASIC2.67□□□□□ -1.98
VIMP08670 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.67□□□□□ -1.98
VIMP08670 AC098614.4-201ENST00000607601 462 ntBASIC2.67□□□□□ -1.98
VIMP08670 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.67□□□□□ -1.98
VIMP08670 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.67□□□□□ -1.98
VIMP08670 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.67□□□□□ -1.98
VIMP08670 CDC27P3-201ENST00000635418 1910 ntBASIC2.67□□□□□ -1.98
VIMP08670 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
VIMP08670 AC004944.1-201ENST00000517807 3059 ntBASIC2.66□□□□□ -1.98
VIMP08670 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VIMP08670 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VIMP08670 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VIMP08670 AL139276.1-201ENST00000311910 1001 ntBASIC2.66□□□□□ -1.98
VIMP08670 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.66□□□□□ -1.98
VIMP08670 RNU6-19P-201ENST00000384718 107 ntBASIC2.66□□□□□ -1.98
VIMP08670 AL031779.1-201ENST00000415663 330 ntBASIC2.66□□□□□ -1.98
VIMP08670 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.66□□□□□ -1.98
VIMP08670 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.66□□□□□ -1.98
VIMP08670 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.66□□□□□ -1.98
VIMP08670 AC003071.1-201ENST00000451219 789 ntBASIC2.66□□□□□ -1.98
VIMP08670 CACYBPP2-201ENST00000453625 678 ntBASIC2.66□□□□□ -1.98
VIMP08670 RNU6-956P-201ENST00000458868 103 ntBASIC2.66□□□□□ -1.98
VIMP08670 SNORA84-201ENST00000459229 133 ntBASIC2.66□□□□□ -1.98
VIMP08670 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.66□□□□□ -1.98
VIMP08670 AC022493.1-201ENST00000492984 337 ntBASIC2.66□□□□□ -1.98
VIMP08670 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.66□□□□□ -1.98
VIMP08670 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.66□□□□□ -1.98
VIMP08670 AC117532.1-201ENST00000514638 323 ntBASIC2.66□□□□□ -1.98
VIMP08670 BTF3P12-201ENST00000519620 469 ntBASIC2.66□□□□□ -1.98
VIMP08670 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.66□□□□□ -1.98
VIMP08670 MIR4635-201ENST00000583759 79 ntBASIC2.66□□□□□ -1.98
VIMP08670 AC119751.7-201ENST00000600494 245 ntBASIC2.66□□□□□ -1.98
VIMP08670 AC010620.1-201ENST00000601088 1102 ntBASIC2.66□□□□□ -1.98
VIMP08670 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.66□□□□□ -1.98
VIMP08670 NRBF2P5-201ENST00000603087 788 ntBASIC2.66□□□□□ -1.98
VIMP08670 AC024153.1-201ENST00000603103 365 ntBASIC2.66□□□□□ -1.98
VIMP08670 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.66□□□□□ -1.98
VIMP08670 AC138649.3-201ENST00000622154 254 ntBASIC2.66□□□□□ -1.98
VIMP08670 AC026422.1-201ENST00000623961 452 ntBASIC2.66□□□□□ -1.98
VIMP08670 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.66□□□□□ -1.98
VIMP08670 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
VIMP08670 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
VIMP08670 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.65□□□□□ -1.98
VIMP08670 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VIMP08670 SNORD3E-201ENST00000362899 217 ntBASIC2.65□□□□□ -1.99
VIMP08670 RNU6-1280P-201ENST00000365211 107 ntBASIC2.65□□□□□ -1.99
VIMP08670 RNU6-282P-201ENST00000365357 103 ntBASIC2.65□□□□□ -1.99
VIMP08670 Y_RNA.367-201ENST00000365544 101 ntBASIC2.65□□□□□ -1.99
VIMP08670 RNU6-1083P-201ENST00000384022 107 ntBASIC2.65□□□□□ -1.99
VIMP08670 RNU6-348P-201ENST00000384386 107 ntBASIC2.65□□□□□ -1.99
VIMP08670 RNA5SP111-201ENST00000411386 101 ntBASIC2.65□□□□□ -1.99
VIMP08670 PTGES3P4-201ENST00000426243 356 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC112220.1-201ENST00000434628 355 ntBASIC2.65□□□□□ -1.99
VIMP08670 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.65□□□□□ -1.99
VIMP08670 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.65□□□□□ -1.99
VIMP08670 AC079781.2-201ENST00000446424 169 ntBASIC2.65□□□□□ -1.99
VIMP08670 NANOGNBP1-201ENST00000448444 480 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC079448.1-201ENST00000449377 373 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.65□□□□□ -1.99
VIMP08670 BTF3P15-201ENST00000455606 336 ntBASIC2.65□□□□□ -1.99
VIMP08670 AL583843.1-201ENST00000456070 346 ntBASIC2.65□□□□□ -1.99
VIMP08670 snoU13.22-201ENST00000459428 104 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC023194.1-201ENST00000493084 308 ntBASIC2.65□□□□□ -1.99
VIMP08670 ARL2BPP4-201ENST00000506854 471 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC116655.1-201ENST00000508324 901 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC107222.1-201ENST00000510899 637 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.65□□□□□ -1.99
VIMP08670 RNA5SP82-201ENST00000516707 92 ntBASIC2.65□□□□□ -1.99
VIMP08670 RN7SKP57-201ENST00000517248 293 ntBASIC2.65□□□□□ -1.99
VIMP08670 AP003072.2-201ENST00000527756 676 ntBASIC2.65□□□□□ -1.99
VIMP08670 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.65□□□□□ -1.99
VIMP08670 MYL12BP1-201ENST00000569826 507 ntBASIC2.65□□□□□ -1.99
VIMP08670 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.65□□□□□ -1.99
VIMP08670 AC012213.3-201ENST00000577199 777 ntBASIC2.65□□□□□ -1.99
VIMP08670 AL670379.4-201ENST00000605279 254 ntBASIC2.65□□□□□ -1.99
VIMP08670 AC135507.1-201ENST00000607214 561 ntBASIC2.65□□□□□ -1.99
VIMP08670 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VIMP08670 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VIMP08670 AC080128.1-201ENST00000474389 1917 ntBASIC2.64□□□□□ -1.99
VIMP08670 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VIMP08670 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.64□□□□□ -1.99
VIMP08670 Y_RNA.77-201ENST00000362962 107 ntBASIC2.64□□□□□ -1.99
VIMP08670 RNU6-74P-201ENST00000384235 107 ntBASIC2.64□□□□□ -1.99
VIMP08670 RNU6-1072P-201ENST00000384703 107 ntBASIC2.64□□□□□ -1.99
VIMP08670 RNU6-443P-201ENST00000384780 107 ntBASIC2.64□□□□□ -1.99
VIMP08670 MIR518D-201ENST00000385014 87 ntBASIC2.64□□□□□ -1.99
VIMP08670 MIR147B-201ENST00000390185 80 ntBASIC2.64□□□□□ -1.99
VIMP08670 PIGFP2-201ENST00000421400 651 ntBASIC2.64□□□□□ -1.99
VIMP08670 YME1L1P1-201ENST00000429435 297 ntBASIC2.64□□□□□ -1.99
VIMP08670 AL445687.1-201ENST00000439946 251 ntBASIC2.64□□□□□ -1.99
VIMP08670 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.64□□□□□ -1.99
VIMP08670 RPL21P133-201ENST00000443666 476 ntBASIC2.64□□□□□ -1.99
VIMP08670 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms