Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 DEFB131D-201ENST00000526803 184 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AP003049.1-201ENST00000529418 457 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 MIR4524B-201ENST00000581569 115 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AC104984.5-201ENST00000586878 94 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 MIR5739-201ENST00000619803 80 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AC231657.1-201ENST00000624313 397 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AC091948.2-201ENST00000636510 279 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 MTND5P10-201ENST00000603719 1809 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 NACAP2-201ENST00000318548 624 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 U3.13-201ENST00000364804 214 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 RNU6-744P-201ENST00000365557 107 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 RNU6-1316P-201ENST00000384242 108 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 USP9YP21-201ENST00000420603 432 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC097463.2-201ENST00000421074 142 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 GPM6BP2-201ENST00000432046 144 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 RPL36AP53-201ENST00000432891 316 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 GPM6BP1-201ENST00000446387 144 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 RPL23AP6-201ENST00000446637 472 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC010631.1-201ENST00000474150 156 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 RPL22P13-201ENST00000493291 347 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 RN7SKP258-201ENST00000517151 304 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 OR5AL2P-201ENST00000532185 920 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.43□□□□□ -2.18
HLA-DQB2P05538 DPPA3P3-201ENST00000603842 430 ntBASIC1.43□□□□□ -2.18
HLA-DQB2P05538 RNU4-42P-201ENST00000364738 142 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 RN7SKP51-201ENST00000410781 304 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 HMGB1P27-201ENST00000431429 603 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 RPL7P34-201ENST00000433316 712 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 GTF2IP3-201ENST00000433887 494 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 SNRPGP13-201ENST00000442212 177 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC055855.1-201ENST00000489563 579 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 CKS1BP2-201ENST00000497342 240 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 RNU6-150P-201ENST00000516237 95 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 RNU6-1028P-201ENST00000517164 93 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AP005639.2-201ENST00000527592 928 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 GNAI2P1-201ENST00000541815 315 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC079598.5-201ENST00000547460 117 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AL031274.2-201ENST00000599419 203 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC243960.4-201ENST00000600532 288 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC091057.3-201ENST00000602684 733 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AL078605.1-201ENST00000603529 500 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC106052.1-201ENST00000608029 497 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 AC007038.2-201ENST00000608095 740 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 RMST_6.1-201ENST00000611980 203 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DQB2P05538 CDC27P3-201ENST00000635418 1910 ntBASIC1.42□□□□□ -2.18
HLA-DQB2P05538 RNA5SP240-201ENST00000365355 128 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 USP9YP6-201ENST00000413550 854 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AL353621.1-201ENST00000418219 243 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AL158823.1-201ENST00000418441 478 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 TIMM9P2-201ENST00000419324 266 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC007098.1-201ENST00000420122 367 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AL160275.3-201ENST00000423876 471 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC108667.1-201ENST00000428618 249 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 HMGB1P31-201ENST00000437242 427 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 HSPE1P21-201ENST00000438283 308 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 DNAJC19P4-201ENST00000440115 345 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 OR6C5P-201ENST00000452388 923 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC092001.1-201ENST00000453012 261 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 RPL36AP48-201ENST00000485521 314 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC018868.1-201ENST00000491307 315 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC139453.3-201ENST00000493276 369 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 HMGB1P35-201ENST00000503360 598 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC093809.1-201ENST00000509155 340 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC117532.1-201ENST00000514638 323 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 SNORA4.4-201ENST00000515921 135 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 RNU6-581P-201ENST00000516214 105 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms