Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC009509.4-201ENST00000619202 509 ntBASIC0.17□□□□□ -2.38
APOBP04114 AC099654.5-201ENST00000636479 350 ntBASIC0.17□□□□□ -2.38
APOBP04114 Y_RNA.67-201ENST00000362870 100 ntBASIC0.17□□□□□ -2.38
APOBP04114 RNU1-36P-201ENST00000365130 165 ntBASIC0.17□□□□□ -2.38
APOBP04114 AC112492.4-201ENST00000456549 352 ntBASIC0.17□□□□□ -2.38
APOBP04114 snoU13.19-201ENST00000459148 104 ntBASIC0.17□□□□□ -2.38
APOBP04114 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.17□□□□□ -2.38
APOBP04114 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.17□□□□□ -2.38
APOBP04114 HSPE1P7-201ENST00000604681 321 ntBASIC0.17□□□□□ -2.38
APOBP04114 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
APOBP04114 TPTE2P4-201ENST00000258589 1605 ntBASIC0.17□□□□□ -2.38
APOBP04114 AL391516.1-201ENST00000554380 2449 ntBASIC0.17□□□□□ -2.38
APOBP04114 SNORA68.1-201ENST00000364537 132 ntBASIC0.16□□□□□ -2.38
APOBP04114 RNU6-48P-201ENST00000384161 107 ntBASIC0.16□□□□□ -2.38
APOBP04114 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
APOBP04114 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.16□□□□□ -2.38
APOBP04114 AL117342.1-201ENST00000404861 406 ntBASIC0.16□□□□□ -2.38
APOBP04114 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.16□□□□□ -2.38
APOBP04114 AL606489.2-201ENST00000433886 234 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.16□□□□□ -2.38
APOBP04114 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
APOBP04114 AC133963.2-201ENST00000513686 578 ntBASIC0.16□□□□□ -2.38
APOBP04114 AL138478.1-201ENST00000612252 832 ntBASIC0.16□□□□□ -2.38
APOBP04114 Y_RNA.476-201ENST00000384347 108 ntBASIC0.16□□□□□ -2.38
APOBP04114 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
APOBP04114 AC009310.1-201ENST00000414414 451 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC023347.2-201ENST00000433994 462 ntBASIC0.16□□□□□ -2.38
APOBP04114 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.16□□□□□ -2.38
APOBP04114 BX248409.1-201ENST00000455497 255 ntBASIC0.16□□□□□ -2.38
APOBP04114 MTND1P16-201ENST00000465177 898 ntBASIC0.16□□□□□ -2.38
APOBP04114 MTND4LP3-201ENST00000468320 276 ntBASIC0.16□□□□□ -2.38
APOBP04114 CIR1P1-201ENST00000524055 1133 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.16□□□□□ -2.38
APOBP04114 AC103710.4-201ENST00000609301 899 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC240442.1-201ENST00000616055 283 ntBASIC0.16□□□□□ -2.38
APOBP04114 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
APOBP04114 MIR604-201ENST00000384880 94 ntBASIC0.16□□□□□ -2.38
APOBP04114 AL138880.1-201ENST00000405824 642 ntBASIC0.16□□□□□ -2.38
APOBP04114 RPL36AP53-201ENST00000432891 316 ntBASIC0.16□□□□□ -2.38
APOBP04114 RPL23AP33-201ENST00000442301 452 ntBASIC0.16□□□□□ -2.38
APOBP04114 SNRPGP6-201ENST00000451124 220 ntBASIC0.16□□□□□ -2.38
APOBP04114 TRBVB-201ENST00000477100 408 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.16□□□□□ -2.38
APOBP04114 MIR5571-201ENST00000577998 113 ntBASIC0.16□□□□□ -2.38
APOBP04114 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.16□□□□□ -2.38
APOBP04114 RNU6-514P-201ENST00000384208 107 ntBASIC0.16□□□□□ -2.38
APOBP04114 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.16□□□□□ -2.38
APOBP04114 AL353706.1-201ENST00000436728 494 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.16□□□□□ -2.38
APOBP04114 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.16□□□□□ -2.38
APOBP04114 MIR892C-201ENST00000516410 77 ntBASIC0.16□□□□□ -2.38
APOBP04114 RNA5SP404-201ENST00000517118 132 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC093027.1-201ENST00000546698 429 ntBASIC0.16□□□□□ -2.38
APOBP04114 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.16□□□□□ -2.38
APOBP04114 RNU6-39P-201ENST00000384344 107 ntBASIC0.15□□□□□ -2.38
APOBP04114 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.15□□□□□ -2.38
APOBP04114 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.15□□□□□ -2.38
APOBP04114 AL354941.1-201ENST00000438600 464 ntBASIC0.15□□□□□ -2.38
APOBP04114 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.15□□□□□ -2.38
APOBP04114 AL589880.1-201ENST00000448271 287 ntBASIC0.15□□□□□ -2.38
APOBP04114 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.15□□□□□ -2.38
APOBP04114 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.15□□□□□ -2.38
APOBP04114 AL590705.4-201ENST00000532209 134 ntBASIC0.15□□□□□ -2.38
APOBP04114 AC007834.2-201ENST00000536310 343 ntBASIC0.15□□□□□ -2.38
APOBP04114 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.15□□□□□ -2.38
APOBP04114 AC012557.2-201ENST00000605919 418 ntBASIC0.15□□□□□ -2.38
APOBP04114 AC139769.3-201ENST00000618383 175 ntBASIC0.15□□□□□ -2.38
APOBP04114 UCA1.1-201ENST00000620952 75 ntBASIC0.15□□□□□ -2.38
APOBP04114 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
APOBP04114 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
APOBP04114 EIF4EP2-201ENST00000422816 654 ntBASIC0.15□□□□□ -2.39
APOBP04114 NDUFB4P7-201ENST00000423198 363 ntBASIC0.15□□□□□ -2.39
APOBP04114 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.15□□□□□ -2.39
APOBP04114 AC138853.1-201ENST00000503549 823 ntBASIC0.15□□□□□ -2.39
APOBP04114 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.15□□□□□ -2.39
APOBP04114 PSMC1P5-201ENST00000512850 177 ntBASIC0.15□□□□□ -2.39
APOBP04114 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
APOBP04114 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.15□□□□□ -2.39
APOBP04114 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.15□□□□□ -2.39
APOBP04114 AC018659.1-201ENST00000551083 169 ntBASIC0.15□□□□□ -2.39
APOBP04114 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.15□□□□□ -2.39
APOBP04114 CLIC4P2-201ENST00000601934 717 ntBASIC0.15□□□□□ -2.39
APOBP04114 AL138726.1-201ENST00000614873 333 ntBASIC0.15□□□□□ -2.39
APOBP04114 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.15□□□□□ -2.39
APOBP04114 MIR101-1-201ENST00000362265 75 ntBASIC0.15□□□□□ -2.39
APOBP04114 PIGFP2-201ENST00000421400 651 ntBASIC0.15□□□□□ -2.39
APOBP04114 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.15□□□□□ -2.39
APOBP04114 AC113194.1-201ENST00000606037 500 ntBASIC0.15□□□□□ -2.39
APOBP04114 AC087821.2-201ENST00000637086 450 ntBASIC0.15□□□□□ -2.39
APOBP04114 SNORA50A-201ENST00000384225 134 ntBASIC0.14□□□□□ -2.39
APOBP04114 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.14□□□□□ -2.39
APOBP04114 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.14□□□□□ -2.39
APOBP04114 RPS15AP27-201ENST00000449183 343 ntBASIC0.14□□□□□ -2.39
APOBP04114 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.14□□□□□ -2.39
APOBP04114 AC114982.1-201ENST00000469402 321 ntBASIC0.14□□□□□ -2.39
APOBP04114 RNA5SP112-201ENST00000515937 99 ntBASIC0.14□□□□□ -2.39
APOBP04114 MZT1P2-201ENST00000604387 248 ntBASIC0.14□□□□□ -2.39
APOBP04114 AC006963.1-201ENST00000624003 1052 ntBASIC0.14□□□□□ -2.39
APOBP04114 AL606490.4-201ENST00000423117 127 ntBASIC0.14□□□□□ -2.39
APOBP04114 PGBD4P5-201ENST00000445958 426 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms